Pusillimonas sp. T7-7: PT7_1887
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Entry
PT7_1887 CDS
T01486
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
put
Pusillimonas sp. T7-7
Pathway
put03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
put00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PT7_1887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
put03019
]
PT7_1887
03016 Transfer RNA biogenesis [BR:
put03016
]
PT7_1887
Enzymes [BR:
put01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PT7_1887
Messenger RNA biogenesis [BR:
put03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PT7_1887
Transfer RNA biogenesis [BR:
put03016
]
Prokaryotic type
tRNA degradation factors
PT7_1887
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
DUF5813
KH_NusA_2nd
aRib
Motif
Other DBs
NCBI-ProteinID:
AEC20427
LinkDB
All DBs
Position
complement(2021329..2023476)
Genome browser
AA seq
715 aa
AA seq
DB search
MFNKVSKSFQYGQHTVVLETGEIARQASGAVLVSIDDTVVLATVVGAKNAKPGQDFFPLT
VDYVEKTYAAGRIPGGFFKREGRPSEKEILTSRLIDRPLRPLFPEGFYNEVQVILHTVSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGQYVLNPTSSQIQASQMNLVVA
GTEAAVLMVESEAQNLSEEVMLGGVMFGHDQMQAAINAIHDLVAEAGKPEWDWQPAPANE
ALAIAVASAAQEGLQAAYLVREKQARTTKLREVYAEVKAKLAEHATAKCEDAPDNVEVEN
MLFDLEAKIVRGQILNGEPRIDGRDTRTVRPISVSLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDSIMGEHRDRFMLHYNFPPFATGETGRFGSPKRREIGHGRLAKRALVSSL
PEAQDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLIKDGGKF
AVLTDILGDEDHLGDMDFKVAGTVTGITALQMDIKIQGITREIMQVALAQAKEGRLHILG
KMKEALDGSRTELSEFAPRMLTVKINPEKIRDVIGKGGATIRALTEETGTQIDIGDDGTI
TISSADLDKAREAERRIKELTADVEVGQEYEGPVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQTVRIKVIEADDKGRLRLSMKAIGGIEAQGGPQAPEAPTEG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaagtgagcaagtcgtttcagtacggtcagcacacggtagttctggaaacc
ggcgagattgctcgccaagcctcaggcgccgtactggtttcgattgacgataccgttgta
ttggcaacggttgttggcgccaagaatgccaagccagggcaagacttcttcccccttact
gttgattacgttgaaaaaacctacgcggccggccgtattccaggcggttttttcaagcgc
gaaggccgtccttccgaaaaagaaatccttacctcgcgtctgattgaccgtccgctgcgc
cccttgtttcctgaaggcttctacaacgaagttcaggtcattctgcacacggtttcggtc
aatcctgaaatcgatcccgacatcgccgccatgatcggcgcctctgccgcattggctatt
tccggtattcctttcaatggacccattggcgccgcacgcgttggttatatcgacggtcag
tatgtgctgaatcccacttccagccagatccaggcgtcacaaatgaatctggtcgtggca
ggcactgaagcagccgtgctgatggttgagtccgaagcgcagaacctgtctgaagaagtc
atgctgggcggcgtgatgtttggccacgatcaaatgcaggccgccatcaacgccattcat
gacttggttgccgaagccggcaaaccagagtgggattggcagcccgcgccagccaacgaa
gcgctggccattgcggtggcatcggctgcccaggaaggcctgcaggcagcctacctggtc
cgtgaaaaacaggcccgtaccaccaaactgcgtgaagtctacgccgaggtcaaagccaaa
ctggccgaacatgcgactgccaagtgcgaagatgcccccgacaacgtcgaagtcgaaaac
atgttgttcgatctggaagccaagattgttcgcggccaaattttgaatggcgagccgcgt
atcgatggtcgcgacacgcgcaccgtgcgccccatcagcgtcagcctgggtgtgcttccc
cgtgcgcacggcagtgccttgttcacgcgtggcgaaactcaggcattggtcgtggctacc
ttgggtaccaagcaagacgagcaaatcattgattccatcatgggcgagcaccgtgatcgt
ttcatgttgcactacaacttccctccgttcgctacgggcgaaacaggccgtttcggctcg
cccaagcgccgcgaaatcggccatggccgcttggccaagcgtgcgctggtttcttccctg
cccgaggcgcaagacttccagtacaccatacgtatcgtgtctgaaatcaccgagtccaat
ggctcgtcttccatggcgtcggtgtgcggcggttcgctggccatgatggacgccggcgtg
ccggtcaaagaccatgtagcgggcgtagccatgggcctgatcaaagacggcggcaagttt
gcagtccttaccgatatcctgggcgatgaagatcacctgggcgatatggatttcaaggtg
gcaggcaccgtgactggcattaccgccctgcaaatggatatcaagattcagggcattacc
cgtgaaatcatgcaggttgctttggcgcaggccaaagaaggccgtctgcatatcctgggc
aaaatgaaggaagccctcgacggctcgcgcacggagctgtccgagttcgctccgcgcatg
cttaccgtcaagatcaatcctgaaaaaatccgcgacgtcatcggcaagggtggtgcaacc
atccgtgcattgaccgaagaaaccggcacgcagatcgacatcggcgacgatggcaccatc
accatttccagcgccgaccttgataaggcacgcgaagccgagcgccgtatcaaggaattg
acggcggatgtcgaagttggtcaggaatacgaaggccccgtcctgcgtctgctggacttt
ggcgccatcgttcaggtattgccaggccgtgatggcttgctgcacatttctgaaatcgcc
aactatcgcatcgccaacatcaacgatgtgctcaaggttggccagacggtacgcatcaaa
gtcatcgaagccgatgacaagggtcgtttgcgtttgtccatgaaggccataggcggtata
gaagcccagggcggtccgcaagcgcccgaggcacccaccgaaggctaa
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integrated database retrieval system
