Parachlamydia acanthamoebae: PUV_03290
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Entry
PUV_03290 CDS
T01552
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
puv
Parachlamydia acanthamoebae
Pathway
puv03410
Base excision repair
puv03430
Mismatch repair
puv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PUV_03290 (recJ)
03430 Mismatch repair
PUV_03290 (recJ)
03440 Homologous recombination
PUV_03290 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
puv03400
]
PUV_03290 (recJ)
DNA repair and recombination proteins [BR:
puv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PUV_03290 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PUV_03290 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PUV_03290 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CCB85279
UniProt:
F8KVY1
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All DBs
Position
369814..371595
Genome browser
AA seq
593 aa
AA seq
DB search
MLSWHNETADLVWVYPQENAELAEKIVKEFRIHPVVAQVFVSRGFTTLEQIHTFLYGRLP
DLCDPFLMGGMPQAVQRIAKAIEQGEGILIYGDNDVDGMTGTALLTEFFRYIGANVFFYV
SNRGAHRGSLIVEALEYALKNECKLLITVDCGITAAGEIAKVVENNIDVIITDHHAPTDK
IPNCIATLNPKLVNNSYPNQDITGVGVAFKLAHAVTEHLTAEGKLPPKKVDLKRYLDLVA
LGTISDMGTLQGENRILVSYGLHELAKRKRLGLSKLMSISDVDLNDLSTFTIASKVAPRL
NSLGRIDDPQKGVQMLLIRNAVAAEKMAIELDLNNIERQRIERAMAVDIESKLLMHPEIL
SKKAILMHSENWHPGVIAILSTRIAKFYNRPTVIMACDDKVAKGSLRSIPEFPLLPVLDQ
CSDILVNYGGHDFAAGVTLKLEHIEEFKRRFIEAAEATLKDSDVLTKLRLDAKINFDELT
FDFMESLKLLEPYGNGNPQPVLYCDAKQAFPPKVLKKAHLKLYLVQGEGDRMLEGIALGK
AAQSPLLRKKDLVLRIAFTPQINNYQGQSIQLMIRDFQILGSSQEIDPLPPLL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgctttcttggcacaatgaaacagccgatcttgtttgggtttatccacaagaaaatgct
gaattggctgaaaaaattgtcaaagagtttagaatacacccagtggttgctcaagtattt
gtctctcgagggtttacgacactcgaacaaatccatacttttttatatggacgattgcca
gacctatgcgatccctttttaatgggtgggatgccgcaagcggtacagcgtattgcaaag
gctatcgaacagggagaagggattctaatctacggggataatgatgttgatggaatgaca
ggaacggctcttttaacagagttttttcgctacatcggagctaacgttttcttttatgtc
tccaatcgaggcgcacatcgaggcagtttaatcgtagaagctcttgaatatgctctaaaa
aatgaatgcaaattgttaattacggtagactgtgggatcactgcagctggagaaattgca
aaggttgtcgaaaacaatatcgatgtgattattactgaccaccatgcgcctacagacaaa
atccccaattgcattgcgacgctaaatccaaagctcgtgaacaactcgtatcccaatcag
gatattacgggagttggagtcgcttttaaattggcgcacgctgtgacagaacatctcact
gcggaaggaaaacttcctcctaaaaaggtggatctcaagcgttacttagatcttgtggct
ttaggtaccatttctgacatggggaccttgcagggtgagaatcgcattctggttagttac
ggtttgcatgaattagccaagagaaaacgtttggggctttccaaattgatgtcaatctct
gatgtggatttaaacgatctttcaacctttacgatcgcttcaaaagtcgcaccacgctta
aatagcttgggcagaattgatgacccgcagaagggtgttcaaatgcttttaattcgcaat
gcggtggctgctgaaaaaatggcgatcgagcttgatctcaataatattgagcggcagcgg
attgaaagggcgatggccgtcgatattgaaagcaagttgctaatgcatccagaaatttta
tccaagaaagccatcctcatgcattctgagaattggcatcctggcgtcattgccatattg
tcgacgcgtattgcgaaattttacaaccgaccgaccgttatcatggcatgtgatgataaa
gtggctaaaggctctttgcgctctatacctgaatttcctctattgcctgttttagatcaa
tgctccgatattttagtgaattatggaggacatgatttcgcggcgggtgttacgttaaaa
ttagagcacattgaagaatttaagcgacgcttcatcgaagccgctgaagccacattaaaa
gacagcgacgttttaaccaaattacgtttggatgcaaaaatcaattttgatgaattaact
tttgatttcatggaatctttaaaattgctcgagccctacggaaatgggaatccacaacca
gttctctattgcgatgcgaagcaagcgttcccccccaaagtgcttaaaaaagcccacctt
aaattgtatttagtgcaaggtgagggagatagaatgttagaagggattgcgcttggaaaa
gcagctcaaagcccattgcttcgcaaaaaagatcttgttttgcgtattgcttttacccct
caaattaataactaccaggggcagagcattcaattgatgattcgagattttcaaatttta
ggcagttcgcaagagatcgatcctcttccacctttgctgtaa
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