Parachlamydia acanthamoebae: PUV_11060
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Entry
PUV_11060 CDS
T01552
Symbol
rnr-B
Name
(GenBank) ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
puv
Parachlamydia acanthamoebae
Brite
KEGG Orthology (KO) [BR:
puv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
puv03016
]
PUV_11060 (rnr-B)
Enzymes [BR:
puv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PUV_11060 (rnr-B)
Transfer RNA biogenesis [BR:
puv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PUV_11060 (rnr-B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
S1
DUF4736
OB_cyt-4
Motif
Other DBs
NCBI-ProteinID:
CCB86056
UniProt:
F8KWQ3
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All DBs
Position
complement(1222548..1224008)
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AA seq
486 aa
AA seq
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MLPNNHNNVDLDQVAHQVMLDHGFIPDFSPPVLNELDHIKEAPAPLPSYKDLRHLLWISI
DNIDSKDLDQLTYAEPMQNGKTHRLYVAVADVSGTVQKESLIDLQAQNNTTSIYTPTVIF
PMLHPKLSTDITSLNPQVDRNAVVVEMEIDEAGKFELLDVYLANVHNHQKLAYPTVSEWL
EHGKPLQSVSPEVHEQLKLQDLISNKIQQFREQLGTLNFDTIEVKPILENHIPVALSKVI
SDRGHTLIENCMIAANSCLSKYLISQNIPILKRIVKKPQRWEKIVEIAKIHDVSLPLEPN
AKALQNFLLQQQKQDPLRFPDLSLTIIKLIGRGEYVPSYPGNEAPGHFDLALEDYAHTTA
PNRRYPDLIMQRLLKSFLQKQNPSYSDAELQTLAQHCTKKEEDANKVERHLKKSAAAMIL
KNQIGQIYSAIVTGASSKGTWVRLLDPPVEGKLVSGFKHLDVGDTIEVELLQVDVAQGYI
DFGRHH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaaataatcacaacaacgtcgatttagatcaggttgctcatcaagttatgctt
gatcacgggtttattcctgatttttccccaccggtcttgaatgaattagatcacattaaa
gaggctcctgcaccacttccatcctataaagacctgcgccatttgctgtggatctccatt
gataatattgattccaaagatcttgatcagttgacctatgcagagcccatgcaaaatggg
aagacgcatcggttatatgtggctgtagcggatgtttctggaacagttcaaaaagaatcg
ctcatcgatttacaggcccaaaacaatacaacgtcgatttatacacctactgtcattttt
cctatgctacatcccaaactttcaacagatatcacttcgttaaatccacaggtggataga
aatgcagtggttgtggaaatggaaattgatgaggccggtaagtttgaactgttggatgtc
tacttagccaacgtacacaatcatcaaaaactagcctatccaaccgtctccgaatggctt
gaacacggtaaacccttgcagtctgtttcaccagaagtccacgaacaacttaagttacaa
gatttgatctcgaacaaaatccaacaatttcgagaacaattgggaactttaaattttgac
acgattgaagtgaaacctatccttgaaaatcacataccggtcgcattaagcaaagtcata
tcagatcgaggccataccctgattgaaaactgtatgatcgccgcgaattcctgcctctcc
aaatatctaattagtcagaacatccctatccttaagcggatcgtcaaaaaaccgcagcgt
tgggaaaaaattgtcgagatagcaaaaattcatgatgtttccttgcctcttgaaccaaat
gcaaaagctttgcaaaattttcttttgcaacaacagaaacaagaccctctaagattccca
gatttgtcattaaccattatcaaattgattgggcggggagaatacgtccctagctatcca
ggcaatgaagctcccggacattttgatctcgctttagaagattatgctcacacgaccgcc
ccaaaccggcgctatccagatttaattatgcagcgactcttaaaaagctttttacaaaag
caaaatccttcttattccgatgcggagctgcaaactttagcacagcactgcacgaaaaaa
gaggaagatgccaataaagtagaaagacatttaaaaaaatctgctgctgcaatgattcta
aaaaaccagattggacagatctactcagccattgtcacaggtgccagttcaaaaggcacg
tgggtgcgccttttggatccaccagttgaaggtaaactcgtgagtggatttaagcacttg
gatgttggcgataccatcgaagttgaactactccaagttgacgtagcacaaggctatata
gactttggacgtcatcactaa
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