Parachlamydia acanthamoebae: PUV_16720
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Entry
PUV_16720 CDS
T01552
Symbol
cshA-B
Name
(GenBank) deAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
puv
Parachlamydia acanthamoebae
Pathway
puv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PUV_16720 (cshA-B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puv03019
]
PUV_16720 (cshA-B)
03009 Ribosome biogenesis [BR:
puv03009
]
PUV_16720 (cshA-B)
Enzymes [BR:
puv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PUV_16720 (cshA-B)
Messenger RNA biogenesis [BR:
puv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PUV_16720 (cshA-B)
Ribosome biogenesis [BR:
puv03009
]
Prokaryotic type
rRNA helicases
PUV_16720 (cshA-B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCB86622
UniProt:
F8L092
LinkDB
All DBs
Position
1879849..1881465
Genome browser
AA seq
538 aa
AA seq
DB search
MSLDLKRFKQEAQLLLRGGDITPRKKPPKRKNGYKMNDTTSSETPQSTLLFTDFGLNDSL
LKAIAEAKFTQPSPIQEKVIPIILNGQDVVAQAQTGTGKTAAFGLPSLNRLDKAAGVGLL
VITPTRELAVQVSDELYRLGKYCGIRTIAVYGGQSIQRQIDGIERGAQVVVATPGRLLDL
LKSRRLSHFSPPIVVLDEADEMLNMGFLEDIQEIFTFLPKERQTLLFSATMPLPIQKLAK
TFLREPEFIKITKKETASQNIQQICYVIHESERDDALVRLLDAQEEAKSIIFCRTKKDVD
RVSSFLTSRGYGARGLHGDMEQPQRQRVIDGFRQNEFQILAATDVAARGLNVLDVTHVYN
YHLPYETESYVHRIGRTGRAGNKGIAITLLNPREVSGLKHIFREHGGNIEYQSIPTLQDV
KRKFAEKFLKKVQQRHFDQEAHALLTELQKEMSLEEISVNLLSLLLDYKKVEGPEHIGIH
PQDIERSGGSSHQKRKRGGFSRDSNNRFRDRGRRPPSRSSGSGAPYRSREGKKAPHSS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgatctcaagaggttcaaacaggaagcgcaactccttttgcgaggaggagat
attacgcctcgtaaaaaaccacctaaaaggaaaaatggttacaaaatgaatgacacaaca
tcttcagaaacccctcaatcgacacttctttttaccgattttggcctcaatgattccttg
ttgaaagctattgcagaagctaaattcacgcaacctagcccaattcaagaaaaagttatc
cccattattctcaatggacaagatgtcgttgctcaagcgcagacaggaacaggaaaaaca
gccgcttttggccttccttccctaaatcgcttagacaaagcagctggcgtcggtcttctc
gtcattactcctacacgtgaacttgcagtgcaagtgagtgatgaactttatcgtttaggc
aaatattgtggcatccgcacaatcgctgtttatggcggacaatctatccaacgtcaaatt
gatggaattgaacggggagctcaagtcgttgtagcaacacccggaagacttttagatctt
cttaaatccagacgcttaagtcacttttctcctcctatcgtcgttcttgacgaagctgac
gaaatgttgaatatgggtttcttagaagacattcaagaaatcttcacattcttgccaaaa
gaaagacaaacacttttattctccgcaacaatgccacttcctattcagaagttagcaaag
acattcttgcgtgaaccagagttcattaaaatcacaaaaaaagagacagctagccaaaac
attcagcaaatctgctatgtgattcatgaatcagaaagagatgatgctctcgtgcgttta
cttgatgcgcaagaagaagctaaatcgattattttctgcagaactaaaaaagatgttgac
cgcgtctcttctttcttaacaagccgtggttacggtgcaagaggattgcatggagatatg
gaacaacctcaacgtcagcgtgttattgatggctttagacagaacgagtttcaaatattg
gctgccacagacgttgctgcacgcggtttaaacgttttagacgtcactcacgtgtataac
taccatcttccatacgaaacagaaagctatgttcaccgcattggccgtacaggacgagcc
ggaaataaagggattgcaattacacttttgaatcctcgtgaagtaagcggattaaaacac
attttccgtgaacacggtggaaacattgagtatcaatccattccaactcttcaagacgtt
aaacgcaaatttgcagagaagtttttgaagaaagttcaacaacgtcattttgatcaagaa
gcacatgcccttttgacagaattacaaaaagaaatgtctctcgaagaaattagcgtaaac
cttctttcattgttactagactataaaaaagtcgaaggtcctgagcatattgggattcac
ccccaagatattgaaagatcaggtggctcttctcatcaaaagagaaaaagaggtggattt
tcaagagattctaacaatcgattccgtgatagaggtcgtcgtcccccatcacgctcatct
ggatccggagctccttatcgctcacgtgaaggcaaaaaagcgcctcactcttcctaa
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