Parachlamydia acanthamoebae: PUV_22320
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Entry
PUV_22320 CDS
T01552
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
puv
Parachlamydia acanthamoebae
Pathway
puv03030
DNA replication
puv03430
Mismatch repair
puv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PUV_22320 (dnaE)
03430 Mismatch repair
PUV_22320 (dnaE)
03440 Homologous recombination
PUV_22320 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puv03032
]
PUV_22320 (dnaE)
03400 DNA repair and recombination proteins [BR:
puv03400
]
PUV_22320 (dnaE)
Enzymes [BR:
puv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PUV_22320 (dnaE)
DNA replication proteins [BR:
puv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PUV_22320 (dnaE)
DNA repair and recombination proteins [BR:
puv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PUV_22320 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
DUF655
DUF1836
Motif
Other DBs
NCBI-ProteinID:
CCB87182
UniProt:
F8L1N3
LinkDB
All DBs
Position
complement(2442910..2446674)
Genome browser
AA seq
1254 aa
AA seq
DB search
MWVPLHVHSQYSILDASASINLIAEKAAEFKMPAVALTDHGNMYGAVEFFKACQGAQVKP
ILGCEVYVAPESRLDRKKIGNRSDFHLTLLAKNMEGYKNLCKLSSIGFLEGFYYHPRIDH
EVLEKYKEGLICLSGCLSSRLSSEILQGTPESIRKHLAWYKDLFGEDYYLEVQRHTMSEE
NIQRDGLYQETWLLQNYQEYIEKQTKVTQALVELSQEFGIPLVATNDSHYIEREDWREHE
ILLNVQSGEPCEILEKDAMGNPKFRQLNPKRRVYSSHECYFKSPTQMQEVFKDLPQALAS
TLEIAEKCHVQLDFKTKHYPVYVPPFLEGQSYTKEERAQAVEKYLWDLCEEGIKKRYDAD
KLAKIQELFPDKDPTQIVRERLEYEMGIIVPKEMSDYLLIVWDFINWAKRNQIPVGPGRG
SGAGSIVLYLIGVTDIEPLRFHLFFERFINPERLSYPDIDVDICMDRRGDVIQYTLEKYG
KDNVAQIITFGTMKARMAIKDVGRVLSVPLSKVNEIAKLVPEDLNITLEKALEKDPDLRA
MYETDEDAKRIIDIGKKLEGSIRSTGIHAAGIIISGAPLSSIIPICNAKDSDMPATQYSM
KPVEMVGMLKVDFLGLKTLTAIQQCVASVNVSTGKLIDWVNLPLDDVRTFDLLNQGKTLG
VFQLESAGMQDLARQLHLDKFEEIIAVGALYRPGPMDMIPSFINRKHGREPIENDHPWMK
DILAETYGIMVYQEQVMQIASKLARYSLGEGDVLRRAMGKKDMAQMAQQREKFRLGALEN
EIEETTSMLVFDKMEKFAAYGFNKSHAAAYGYLSYVTAYLKANHPREWMASLMTCDSDDL
SKVAKFIREAQTMGIAILPPDINEAGSTFIATPQGIRFAMKGIKGVGEGVVEAIVQERNR
SGPFTHFYQFFKRIDLKKVGKKSIENLVDAGSFDFTGWSRDALRQSIDPMYETALKEKRE
EQSGVLTFFDLMGATSEAKFSFAPNVLNPTSKQNILLKEKELLGFFLTGHPLDSFQEYMQ
RLSCVNFSAIDMLGNDAVFRSAVIIESVQLRLSAKTQKKFAILRISDGIESYELPIWPDL
YEQKGELLKENQPLYVVLQMDKKEEAVRLSCRWLDDLSKVDEAMIEACDKAYDRAKFQAT
RTYPQKSTQTAGQDKGGSMTKNVAPSKQPEPVKPPKERKCVVILDMEKVRHSQVLKMKKI
FSEHRGDMPVELNFMIGTRELATLHIDVSSGILFNLKLKEELLQLAAIKDVQGD
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcccattacacgttcattcacaatactcgattttggatgcatcggcttctatc
aatctaattgctgaaaaagcggctgaatttaaaatgccggcagttgccctaacagatcac
gggaatatgtatggtgctgttgaattttttaaagcatgtcagggtgcgcaagttaagcct
attctagggtgtgaggtgtacgttgctccagaatcacggctcgatcgtaagaaaatagga
aaccgttctgattttcatttgactcttcttgcaaaaaacatggaggggtataaaaacctt
tgcaaactttcttctattggatttttggagggtttttattaccacccgcgaatcgaccat
gaagttttagagaaatataaagaggggctaatctgtctgtcaggatgtttaagtagtcgg
ctatcaagtgaaattctgcagggaactcctgagagcatccgaaagcatctagcttggtac
aaggatttatttggcgaagactattatttagaagttcaaagacatacgatgtctgaagaa
aatattcaaagagatggcctttatcaagagacatggttgcttcaaaactatcaagaatac
attgagaaacagaccaaggtgacgcaagctctagttgaactttctcaagagtttggtatt
ccgttagttgcgacaaacgacagccactatatcgaacgcgaagattggcgagagcatgag
attttattgaatgtgcaatcgggcgaaccttgtgaaatcttagaaaaagatgcgatgggg
aatcctaaatttcggcagctgaaccccaagcgacgtgtttattcttctcatgaatgttat
tttaaatcacccacgcaaatgcaagaagtttttaaagatcttcctcaggcgcttgcatca
acattagaaatcgcagaaaaatgtcacgttcaactcgattttaaaacaaaacattatcct
gtgtatgtcccgccctttttggaaggacaaagctataccaaggaagagcgagcgcaagct
gttgaaaagtatctttgggacctatgcgaagaagggattaagaaacgttatgatgcggat
aagcttgcaaagatccaagagcttttccctgataaagatcccacgcaaattgtacgagag
cgattggaatatgaaatgggaatcatcgttccaaaagaaatgagcgattacttgctgatc
gtatgggattttatcaattgggcaaaaagaaatcagatccctgtgggaccaggacgtggt
tctggagcgggatcaatcgttttatacctaatcggtgtgaccgatattgaacctttgcgc
tttcatctcttcttcgaacgttttattaatcctgagcgtctttcttatcccgatatcgac
gtagatatttgcatggatcggcgcggagatgtgatccaatataccttggaaaaatatgga
aaggataatgttgcccagatcattacgttcggtacaatgaaagcgcgtatggccattaag
gatgtcggccgtgtgctaagtgtgcccctctctaaggtcaacgagattgctaaacttgtt
ccagaggatttaaacattactcttgaaaaagcgctggaaaaagatcctgatttgcgtgcg
atgtatgaaacagatgaagacgctaagcgcattattgacattgggaaaaaattagaaggg
tctatccgcagtacagggattcacgcagcagggatcattattagtggggcacccttatct
tcgatcattcccatttgcaatgcgaaagattcagacatgccggcaacccagtattctatg
aagcctgtggaaatggtgggcatgctgaaagtggactttttggggctcaaaactttgaca
gcgattcagcaatgtgtcgcatcagtgaatgttagtacagggaagctaatcgactgggtg
aacctgccgcttgatgatgtgcggacatttgatttgcttaaccaaggaaaaacgttaggt
gtgttccagcttgaatctgccggcatgcaagatttggctaggcagctgcacttagacaaa
tttgaagagattattgcggttggtgcgctttatcgtccggggccaatggatatgattcct
tcctttatcaatcgtaagcacggacgcgagcctattgaaaatgaccacccttggatgaaa
gacatcttggctgaaacctatggaattatggtctatcaagagcaggtcatgcaaattgcc
agtaagcttgcgcgctattcacttggtgagggtgatgtgcttcggcgagctatggggaaa
aaagacatggcgcaaatggctcaacagcgagaaaaattccgtttaggagctcttgaaaat
gagattgaagaaactacttccatgctcgtatttgataaaatggaaaaatttgcggcctat
ggatttaacaagtcccacgcggcagcttacggttatctttcctatgtgacagcctattta
aaggcgaatcatccgagagaatggatggcttctttaatgacgtgtgatagtgatgactta
agcaaagtggcgaagtttattcgagaagcccaaaccatgggaattgcaattcttcctcca
gatattaacgaagcaggatccacttttattgcaacaccacaagggatccgctttgccatg
aaggggattaaaggggtcggagaaggggtcgtagaggcaattgtgcaagaacgtaaccgt
agcggtccttttactcacttctatcaattttttaaacggatcgatttaaaaaaagtggga
aaaaagagtattgaaaacctggtggatgcagggagtttcgattttacaggatggtctcga
gatgctttacgtcaaagtattgatccaatgtatgaaacagccttgaaagagaagcgggaa
gagcagtcaggggttttaacattttttgacttaatgggagctacctcagaggctaagttt
agctttgctccaaacgtgctgaatccgacttcaaagcagaacatcctgttgaaagagaaa
gaattgttaggtttttttctgactgggcatcctttagacagctttcaagagtatatgcag
cgtttatcctgcgtgaatttttccgcgatcgatatgctaggaaatgatgctgtttttaga
tccgctgtgattatcgaatctgtgcagctccgtttatcggctaaaacgcaaaagaagttt
gcgattctgcggataagcgatggcattgaaagttatgaactgcccatttggccggatcta
tacgagcaaaaaggggagcttcttaaagaaaatcagcctttatatgtcgtcttgcaaatg
gacaaaaaagaagaggcggtgcggctttcttgtcgttggctagatgatctatctaaagtg
gatgaagccatgattgaagcttgtgataaagcctacgatcgcgcaaaatttcaggcaact
agaacataccctcaaaaaagtacgcaaactgctggtcaagataaaggaggcagcatgaca
aaaaatgtagcgccatccaaacagccggagcctgttaaacctccaaaagaaagaaaatgt
gtcgtcatcctcgatatggaaaaggtgagacatagccaagttctgaaaatgaaaaaaatc
ttttccgaacatcggggtgatatgcctgttgaactcaattttatgattggaacacgtgaa
ttagccacattgcatatcgatgtgtcttccggaattttgtttaatttaaaattaaaagaa
gagcttttgcagttagctgcgattaaagatgttcaaggagattga
DBGET
integrated database retrieval system
