Pantoea vagans C9-1: Pvag_0097
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Entry
Pvag_0097 CDS
T01326
Symbol
hepA
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pva03021
]
Pvag_0097 (hepA)
Transcription machinery [BR:
pva03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pvag_0097 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
NAT10_TcmA_helicase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADO08317
LinkDB
All DBs
Position
complement(103278..106184)
Genome browser
AA seq
968 aa
AA seq
DB search
MVFTLGQRWISDTESELGLGTVVAIDTRMITLLFPATGENRLYARNDSPVTRVIFNPGDT
ITSHEGWQMRVDEVRNENDLMTYIGTRLDTEESDVMLREVMLDSKLVFSKPQDRLFAGQL
DRMDRFALRFRARKYQSEQYRLPISGLRGMRTNLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIQQQLLAGRAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDDRYTEAQH
DSDNPFETEQLIICSLDFVRRNKQRLEMLADAEWDLLVVDEAHHLAWSEGEPSREYQVIE
KLAEKTAGVLLLTATPEQLGMESHFARLRLLDPDRFHDFAAFVEEQQHFRPIADAVTALL
ADNAISQEEMNRINDLVGEQDIEPLLQVANSDRDGKLEARQELISMLMDRHGTSRVLFRN
TRNGVKGFPKRELHQIRLPLPAQYQTAIKVSGIMGTRKSAEERARDLLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSNRKEKVLVICAKAATALQLEQVLREREGIRAAVFHEGLSI
IERDRAAAWFASEENGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQILVPWLEQTAQAVLLRWYHEGLDAFEHTCPTGRTIYDSVHSQLIGYLAAPENN
EGFDAFITDCRKQHDALKSQLEQGRDRLLELNSNGGESAQLLANAISEQDNDTGLVNFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPEDGCTITFNRDQALSREDTQFITWE
HPLIRNGLDLILSGDTGSSALSLLKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPTP
IRLLMDTKGTNLAGKVEFESFNRQLNAVNRHTASKLVNAVQQDVHAILTQAEESVVSEAR
AVIDAARAEANEKLGAELSRLNALKAVNPNIRDDEVEALESNREQVLESLDQANWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtttttacattaggtcagcgctggattagtgatacggaaagtgaactgggactgggc
accgtggtggcgatcgatacccgcatgatcaccctgctgtttccggccacgggggaaaac
cgcctctacgcccgcaacgattcgccggttacccgcgtcatctttaatccgggtgatacc
atcaccagccacgaaggctggcagatgcgcgtcgatgaagtacgcaacgaaaatgacctg
atgacctatatcggtacccggctggataccgaagaaagcgacgtgatgctgcgcgaagtg
atgctcgacagcaagctggtattcagtaagccgcaggatcgcctgtttgccggccagctc
gaccggatggatcgtttcgccctccgcttccgcgcccgtaaataccagagcgagcagtac
cgcctgccgatcagcggcttacgcggtatgcgcaccaacctgatccctcaccaactgcat
atcgcccacgatgtcggccgtcgccatgcgccgcgcgtgctgctggccgatgaagttggc
ctgggtaaaactattgaagccgggatgatcatccagcaacagctgctggcgggtcgtgct
gagcgtgttctgatcgtggtgcctgaaaccttacagcaccaatggctggtcgaaatgctg
cgccgcttcaacctgcgctttgcgctgtttgatgacgatcgctataccgaagcgcagcac
gacagcgataacccgtttgaaacggagcagctgattatctgctcgctggactttgtgcgc
cgtaacaaacagcgccttgagatgctggccgatgccgaatgggatctgctggtggtggat
gaagcgcaccatctggcctggtcagaaggcgagccaagccgcgaatatcaggttatcgaa
aagctggccgaaaaaactgccggcgttctgctgctgaccgcaacaccagagcagctgggt
atggagagccacttcgcccgtctgcgcctgctcgacccggaccgtttccatgactttgcc
gcctttgtagaagagcagcagcatttccgcccgattgccgatgccgtcacagcgctgctg
gcggacaacgcgatctcccaggaggagatgaaccggatcaacgatctggtcggcgagcag
gacattgagccgctactgcaggtcgccaacagcgaccgtgatggcaagctggaggcgcgc
caggagctgatctccatgctgatggatcgccacggcactagccgcgtactgttccgtaat
acccgtaatggcgttaaaggcttcccgaaacgcgagctgcatcagatccgtctgccgctg
cctgcgcagtatcagacggcgattaaagtctccggcattatgggtacgcgcaaaagcgcc
gaggagcgggcgcgcgacctgctctacccggagcagatttatcaggaatttgagggcgac
agcgggacctggtggaacttcgacccgcgcgtcgaatggctgatgggctatctcaccagc
aaccgtaaagagaaagtgctggtgatctgcgccaaagccgccaccgcgctgcagctggag
caggtgctgcgtgaacgtgaaggcatccgcgccgcggtgttccacgaaggtctgtcgatc
attgaacgtgaccgtgctgccgcctggttcgcctcagaagagaacggcgcgcaggtgctg
ctgtgctccgagatcggttcagaaggccgtaacttccagtttgccagccgtctggtgatg
ttcgacctgccgtttaacccggacctgctggagcagcgtatcggtcgtctggaccgtatc
ggtcaggcgcacgatattcagattctggtgccgtggctggagcagaccgcacaggcggtg
ctgctgcgctggtatcacgaagggctggacgcgtttgagcacacctgcccgaccggccgt
accatctatgacagcgtccattcacagctgatcggctatctggccgcgccggagaacaat
gaaggcttcgatgcgtttatcactgactgccgtaaacagcacgacgcgctgaaatcgcag
ctggaacagggtcgcgatcgcctgctggaactgaactccaacggcggtgaatcggcgcag
ctgctggccaatgctatcagcgagcaggataacgatactggcctggtgaacttcgcgctt
aacctgtttgatatcgtcggcatcaatcaggaagatcgcagcgataacctgattgtgctg
accccttccgaccacatgctggtgcccgatttccctggcctgccggaagatggctgcaca
attacctttaaccgcgatcaggcactgtcacgcgaggatactcagttcattacctgggaa
cacccgctgatccgtaacggtctggatctgatcctgtcaggcgataccggcagcagcgca
ctgtcactgctgaagaacaaggcgctgccggtgggaacgctgctggtcgagctgatctat
gtggttgaagcgcaggcaccgaagcatctgcaactgacccgcttcctgccaccgacgcca
atccgtctgctgatggataccaaaggcactaacctggcgggcaaagtggagttcgaaagc
tttaaccgtcagctgaatgcggttaaccgtcacaccgccagtaaactggtgaatgcggtg
cagcaggatgtgcatgcgattctgacgcaggccgaagagagcgtcgtcagtgaagcgcgt
gcggtgattgatgcggcacgtgctgaagcgaacgagaagctgggtgccgagctttcgcgt
cttaacgcgctgaaagccgtcaacccgaacatccgcgacgatgaagttgaggcgctggaa
agcaaccgcgaacaggtgctggaaagtctcgaccaggccaactggcgtctcgacgcgctg
cgcctgattgtggtgacacaccagtaa
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