Pantoea vagans C9-1: Pvag_0310
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Entry
Pvag_0310 CDS
T01326
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00052
Galactose metabolism
pva00511
Other glycan degradation
pva00600
Sphingolipid metabolism
pva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Pvag_0310 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
Pvag_0310 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Pvag_0310 (lacZ)
Enzymes [BR:
pva01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Pvag_0310 (lacZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Glyco_hydro_72
F-box_4
Motif
Other DBs
NCBI-ProteinID:
ADO08523
LinkDB
All DBs
Position
complement(339071..342208)
Genome browser
AA seq
1045 aa
AA seq
DB search
MTLSQAAFSDILSRRDWENPVVTSLHRLDAHPPFASWRDEAAARDDTPSVSLQSLNGEWG
FSYFAQPEAVPASWLLQDLPDASTIPVPANWQMHGFDAPIYTNVQYPIPVNPPFVPKENP
TGCYSLTFSTDAAWLTSGQTRIIFDGVNSAFHLWCNGQWIGYSQDSRLPAEFDLSPYLRP
GKNRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVTLLHKPQVHLADVQLETRLSPEFTRAE
LRAQVRVALPPDLTSRYQLRLTLWQGEQPVAQCQQLLGSAIIDERGHYPERALLSLPVER
PALWSAETPHLYRATLALLDGDQQLIEVEAYDVGFRQVTIDNGLLCLNGKPLLIRGTNRH
EHHPELGQVVDEATMCRDIELMKQHNFNAVRCSHYPNHPLWYRLCDQYGLYVVDEANIET
HGMQPMNRLSDDPRWFAAFSERVTRMVQRDRNHCSIIIWSLGNESGHGATHDALYRWVKS
SDPTRPVQYEGGGADTAATDIICPMYARVEEDQPFPAVPKWSLKKWIGLPGETRPLILCE
YAHAMGNSFGGFAKYWEAFRQFPRLQGGFVWDWVDQSLTRYDDQGNPWQAYGGDFGDKPN
DRQFCMNGLVFADRTPHPALYEAQRAQQFWQFTVDPGDPLSVTVSSDYLFRHSDNEVLRW
RIEQEGLVVTEGEVLLDIGPQGQQRITLPSPPALQGECWLNVAVHQIHPTRWSAADWRVA
WHQWALPSLLALPPLPEKAEAPVLHDDASEIIVTHQRQRWHFSRHSGELTQWFVNETPTL
LSPLQDCFIRAPLDNDIGTSEAERVDPNAWVERWKAAGYDQMSSQLVSIAAHALPQAVQI
ETLHSWLASGKLAFISRKRYLINAQGELQLQLSVEQSRGLPPPARIGLRCELAQIPQQVS
WLGLGPHENYPDRQLAAQFSHWQLPLDQLSTPYVFPGENGLRGGTRQLDSGSWQVSGDFA
FSLSRFSLEQLREASHRHLLRPEAGCWLHLDAFHMGVGGDDSWSPSVSPEFLLTQQRWQA
ELKICQPTRATQSSDAGKSVSETAR
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgactctctcacaggctgctttcagtgacatcctctcccggcgcgactgggaaaatccg
gtcgtgacctcgctgcatcggctggatgcgcacccgccttttgccagctggcgggacgaa
gcagcggcgcgtgatgacacgccctcggtgtcactgcagagcctgaatggggagtggggt
ttcagttactttgcgcagcctgaggcggtcccggccagctggttactgcaggatctgccg
gatgccagcacgattccggtgccggcaaactggcagatgcacggctttgatgcgcctatt
tacaccaacgtgcagtatcccattccggttaatcccccgtttgtacccaaagagaacccg
acaggatgttactcgctcacattcagcacggacgccgcctggctcacttccgggcagaca
cgcatcatttttgacggcgtcaattcagcctttcatctgtggtgcaatggacagtggatt
ggctactctcaggacagccgcctgcccgccgaattcgacctgagcccttatctgcgaccg
ggcaaaaaccggctggcggtgatggtgctgcgctggagcgacggcagctatcttgaagat
caggatatgtggcggatgagcggtattttccgcgatgtcacgttactgcataagccgcag
gtgcatctggctgacgtgcaactggaaacccggctcagcccggagtttacccgtgccgag
ctgcgcgcccaggtccgcgttgccttgccgcctgacctcacctcgcgctatcagctgcgc
ctgacgctatggcagggtgaacagccggttgcgcagtgtcagcagctgctgggcagtgcc
attattgacgagcggggtcactatcctgaacgcgccctgctcagcctgccggtggaacgg
cccgcgctgtggagcgctgaaacgccacacctctatcgcgccacgctggcgctgctggat
ggggatcagcagctgatcgaggtggaagcgtatgatgtcggcttccgtcaggtcactatc
gataacggcctgctctgtctcaacggcaaaccgctgctgatccgtggcactaatcgccac
gaacaccatccggagctcggtcaggtggtggatgaggcaacgatgtgccgcgacattgag
ctgatgaagcagcacaatttcaacgcggtgcgctgttcgcactatcccaatcatcctctc
tggtatcggctgtgcgaccagtacgggctttatgtggtggatgaagcgaatatcgaaacc
cacggcatgcagccgatgaaccggctctccgacgatccccgctggttcgctgcctttagc
gaacgtgtgacgcgtatggtgcagcgcgatcgtaatcactgcagcattattatctggtcg
ctgggcaatgagtcgggacatggtgccacgcatgacgcgctctaccgctgggtgaaaagc
agcgatcctacccgtccggttcagtatgaaggcggcggtgcggacaccgccgcgaccgat
atcatctgcccgatgtatgccagggtcgaggaagatcagccattcccggcggtgccgaag
tggtcgctgaaaaagtggatcggcctgccgggcgaaacgcgtccgctgatcctgtgtgag
tatgcgcatgccatgggcaacagctttggcggtttcgcgaaatactgggaggccttccgc
cagttcccgcgcctgcagggcggcttcgtctgggactgggtggatcagagcctgacccgc
tatgacgatcagggcaacccgtggcaggcttacggcggtgattttggcgataaacccaac
gatcgtcaattctgtatgaacgggctggtgtttgccgatcgcacgccgcatccggcgctg
tatgaggcgcagcgcgcacagcagttctggcagttcaccgtcgatcccggcgacccgctg
agcgttacggtcagcagcgactacttattccgtcacagtgacaatgaagtgctgcgctgg
cgcattgagcaggaaggcctggtagtgacggaaggtgaagttttactggatatcggccca
cagggtcagcagcggatcactctgccgtcaccgcccgccttacagggcgaatgctggctt
aatgttgctgttcatcagattcacccgacccgctggagtgctgccgactggcgtgtcgcc
tggcatcagtgggcgctgccttcgctgctggcgctgcccccgctgccggaaaaagctgaa
gcaccggtcctccatgatgacgccagtgagattatcgtcacccatcagcggcaacgctgg
catttttcacgccacagcggtgaactgacgcagtggttcgtcaatgagacaccgacgcta
ctctcgccgcttcaggactgctttattcgcgcgccgctggacaatgacatcggcaccagc
gaagcggaacgggtagatcccaatgcgtgggtcgaacgctggaaggcggcaggatatgac
cagatgagcagccaactggtgtcgatagccgcgcatgcgttgccgcaggcggtgcagatc
gaaacgctgcatagctggctcgccagtggcaagcttgcctttatcagccgtaagcgttat
ctgatcaatgcgcagggggagttgcagttacagctttccgttgagcagtcacgcggattg
ccaccgcccgcacgcatcggcttacgctgtgagctggcgcagataccgcagcaggtaagc
tggctcggcctgggaccgcatgaaaactatcccgatcgccagctggccgcgcagttctca
cactggcaactgccgctggatcagctttcaaccccctacgttttccccggtgagaatggt
ctgcgtggcggcacccgccagctcgacagcggcagctggcaggtcagcggcgatttcgct
ttctcactgagccgcttcagtctggaacagctgcgtgaggcatcccaccgccaccttctg
cgtccggaggcgggctgctggctgcatctggatgccttccatatgggcgtcggcggtgat
gactcctggagccccagcgtcagtcctgagtttttgctgactcagcagcgctggcaggct
gaactgaagatttgtcagccgacgcgggcaacacagtcttcggacgccggtaaaagcgtt
tcagaaacagcacgttaa
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