Pantoea vagans C9-1: Pvag_0546
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Entry
Pvag_0546 CDS
T01326
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00020
Citrate cycle (TCA cycle)
pva00190
Oxidative phosphorylation
pva00650
Butanoate metabolism
pva00720
Other carbon fixation pathways
pva01100
Metabolic pathways
pva01110
Biosynthesis of secondary metabolites
pva01120
Microbial metabolism in diverse environments
pva01200
Carbon metabolism
Module
pva_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pva_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pva_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pvag_0546 (sdhA)
00650 Butanoate metabolism
Pvag_0546 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
Pvag_0546 (sdhA)
00720 Other carbon fixation pathways
Pvag_0546 (sdhA)
Enzymes [BR:
pva01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Pvag_0546 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
FAD_binding_3
Thi4
FAD_oxidored
BEX
Ins_P5_2-kin
Motif
Other DBs
NCBI-ProteinID:
ADO08751
LinkDB
All DBs
Position
569219..570985
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AA seq
588 aa
AA seq
DB search
MSLPIREFDAVVIGAGGAGMRAALQISQAGQSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLEDGRVYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNADGAVVGC
TAICIETGETVYFKAKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSMMIEIREG
RGCDGPWGPHIKLKLDHLGKEVLESRLPGILELSRTFAHADPIKEPIPVIPTCHYMMGGI
PTKVTGQALRVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLL
ESIQEQGELRDATEDEIAVAMARFNRWENNTTGEDPVEIRKALQRCMQNNFSVFREGDAM
AQGLEELKEIRQRLKSARLDDRSPDFNTQRIECLELDNLMETAFATAVAANYRTESRGAH
SRFDFPDRDDENWLCHSLYVPETESMTRREVNMQPKLRAAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccaatcagagagtttgatgccgtggtgatcggcgcaggtggcgcaggaatg
cgggccgcactgcaaatctcccaggccggtcagagctgtgccctgttatcgaaagttttc
ccgacccgttcccacaccgtatctgcgcagggcggtattaccgttgcgctgggtaatacc
catgaagataactgggaatggcatatgtacgacaccgtcaaaggctccgactacatcggt
gaccaggacgcgattgaatatatgtgtaaaaccggcccggaagcgattctggaactggag
cacatgggcctgccgttctcgcgtctggaagatggtcgtgtctatcagcgtccgtttggt
ggtcagtcgaagaacttcggcggcgagcaggcggcacgtaccgcagcagcagcagaccgt
accggccacgccctgttgcataccctttatcagcagaacctgaaaaacaaaaccaccatt
ttctctgagtggtatgcactggatctggtgaaaaacgccgatggcgcggtagtcggttgt
accgctatctgcatcgaaaccggcgaaaccgtctatttcaaagcaaaagcgaccattctg
gccaccggcggcgcgggccgtatctatcagtccaccaccaatgcacacatcaacaccggt
gacggcgtgggtatggcattgcgtgcgggtgtgccggtgcaggatatggagatgtggcag
ttccacccaaccggtatcgccggtgcgggcgtgctggtcaccgagggctgccgtggtgaa
ggcggctatctgctgaacaaacatggcgaacgcttcatggagcgttatgcgccaaacgcc
aaagatctggcgggccgcgacgtcgttgcgcgctcaatgatgattgaaatccgtgaaggt
cgcggctgtgacggtccgtggggcccgcacatcaaactgaaactcgatcacctgggtaaa
gaggtgcttgagtcacgtctgcctggcatcctcgaactgtcacgcacctttgctcacgcc
gatccgatcaaagaacctatcccggtcattccgacctgccactacatgatgggcggtatt
ccgaccaaagtgaccggtcaggcactgcgtgtgaatgagcagggggaagatgtggtgatt
cctggcctgttcgctgtcggcgaaattgcctgcgtatcggtacacggtgccaaccgtctg
ggcggcaactcactgcttgacctggtggtctttggccgcgcagcgggtctgcacctgctg
gagagtattcaggagcagggcgaactgcgtgacgccacggaagatgaaatcgccgttgcg
atggcgcgcttcaaccgctgggaaaacaacaccaccggtgaagatccggttgagattcgt
aaagcgctacaacgctgcatgcagaacaacttctctgtattccgcgaaggcgacgcgatg
gcgcagggtctggaagagctgaaagagattcgccagcgtctgaaatcagcgcgtctggat
gaccgctcaccggatttcaacacccagcgtattgagtgtctggagctggataacctgatg
gagacggcctttgccacggcggtagcggctaattatcgcaccgagagccgcggtgcgcac
agtcgcttcgacttcccggatcgtgatgatgaaaactggctgtgccacagtctttatgtc
ccggaaaccgaaagcatgacgcgccgtgaggtgaacatgcagccgaaactgcgcgcggcg
ttcccgccgaaagtgcgtacctactaa
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