Pantoea vagans C9-1: Pvag_0751
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Entry
Pvag_0751 CDS
T01326
Symbol
ycbB
Name
(GenBank) Uncharacterized protein ycbB
KO
K21470
L,D-transpeptidase YcbB
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pva01002
]
Pvag_0751 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pva01011
]
Pvag_0751 (ycbB)
Peptidases and inhibitors [BR:
pva01002
]
Cysteine peptidases
Family C82
Pvag_0751 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pva01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Pvag_0751 (ycbB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ADO08953
UniProt:
E1SIE8
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All DBs
Position
794000..795811
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AA seq
603 aa
AA seq
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MLLVKKLNHHRVLSLLALALTAVPFTLPQAAVIAAMPGTTQAAITVSESQHRIRQAFTSV
DQPFYLGPLATLYASRHMQPLWQDAQAVQKFQQQLAEVALSGVQPQFTRWIERLTNPAIT
GFARDVALSDAMLGYLQFVSNVPTQGETWLYSNVPYRLTQPSVAVVNQWQNAVNAGSADT
FIASLQPQHPQYQLMHVALKALLSDKQPWPQLKSSETLRPGQVSDDVPALREILQRSGML
TAQVNAPAPDDDAVPAAPVPVSHSDQPVAVSPSAAPVTNLLTPSPQSPGNIQTSTLEGNT
ANVYDETLVAGVKRFQQWQGLDGDGAIGTRTRQWLNVSPQMRASLLALNIQRLRLLPDDM
HNGIMVNIANYSLIYYNNGNKILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVR
KDIIPKVKQDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVSAASFPYRMIQAPGVANA
LGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGLLLQDAGWNDSRI
SSTLKEGDTRYVPIRHRIPVNLYYLTAWVADDGKPQFRTDIYNYDDTARSGSQALSRAGQ
LLL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggtaaaaaaattaaatcatcatcgcgttttatcattgttagcgctggcgcta
accgctgttccatttacgctaccacaggccgctgtcatcgccgcgatgccagggacaacg
caggcggctatcacggtttccgaaagtcagcaccgcatccgtcaggcttttaccagtgtc
gaccagccattctatctggggccgctggcaacgctctatgcttcccgccatatgcagccg
ctctggcaggatgctcaggcggtgcagaaatttcagcagcagctggctgaggtggcactt
tcaggcgttcagccgcagttcacgcgctggattgagcgtctgacgaatccggctattacc
ggctttgcccgtgatgtcgcgctctctgatgcgatgctgggctatctgcagtttgtttca
aatgtgccgacgcagggtgaaacctggctctacagcaacgttccctacaggctgacccag
ccgtcagtcgcggtggtgaatcagtggcagaacgcagtcaatgcgggttcggctgacacg
tttattgcctcattacagccgcagcatccacagtatcagcttatgcacgtcgcgctgaaa
gcgttgctcagcgataagcagccctggccgcaactaaaaagcagtgaaaccctgcgtccc
ggccaggtcagtgatgatgttcctgccctgcgtgaaattctgcagcgcagcggcatgtta
acggcacaggttaacgcgcccgcaccagatgacgatgccgttcctgccgcgccggtaccg
gtgagccacagcgatcagccggtcgcggtgagtccttccgccgcgccagtcaccaatctg
cttacgccttcaccacaatcaccgggtaacatccagacttcgacgctggaagggaatacc
gccaatgtctatgacgagacgctggttgcaggagtgaagcgtttccagcagtggcagggg
ctggatggggatggggctatcggtaccagaacgcggcagtggcttaacgtctctccgcag
atgcgcgcttcgctgctggcgctgaatattcagcgccttcgcctgctgccggacgatatg
cacaatggcatcatggtgaacatcgccaactactcgctcatctattacaacaacggcaac
aagattctctcatcgcgtgtcatcgtcggtcgtcccgatcgtaaaacgccactcatgcgc
agtgcgctgaataacgtcgtgctcaacccgccgtggaatgtgccgacaacgctggtgcgt
aaagacattattccgaaggtgaagcaggatccaacctatctttacaagcatgggtataca
ctgctgtcgggctggagtgcagatgctgaagtgattgatcccagcatgatcgactggcgc
atggtctctgcggcgtcgtttccctatcggatgattcaggctccgggcgtggcgaatgcg
ctgggccggtataaatttaatatgccgagttcagatgcaatctacctgcatgacacgcca
aaccataacctgttccagcgtgatatccgtgcgctcagttcaggctgtgtgcgggtgaac
aaagcgtctgaactggcagggttattgctgcaggatgcgggctggaatgactcccgaatt
tccagcacgctgaaagagggtgacacccgctatgtgccgattcgccaccgcattccggtc
aatctctattacctgacggcgtgggtcgctgatgatggcaaaccgcagttccgcacagat
atttacaattatgatgacaccgcccgttcgggcagtcaggccctgagtcgggccgggcaa
ttactgctctag
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