Pantoea vagans C9-1: Pvag_0806
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Entry
Pvag_0806 CDS
T01326
Symbol
ycdC
Name
(GenBank) HTH-type transcriptional regulator rutR
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pva03000
]
Pvag_0806 (ycdC)
Transcription factors [BR:
pva03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Pvag_0806 (ycdC)
BRITE hierarchy
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GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_21
Motif
Other DBs
NCBI-ProteinID:
ADO09006
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Position
851186..851821
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AA seq
211 aa
AA seq
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MNSDEKKPTRRSRAVAAKRAAILEAALTFFSQFGIHGTSLDKVAELADVSKTNLLYYFPS
KEVLYVAVLKQILDVWLAPLRALAHDQDPLVAIRRYIRLKLEVSRDHPQASRLFCLEMLQ
GAPLLKGELAGDLKQLVDDKAAIIERWIDEGRLAGVQPQHLIFMLWATTQHYADFATQVE
AVTGQTLSDPAFFDQTVENVQRMIIEGIRVR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagcgatgaaaaaaagccaacgcgtcgttcgcgtgcggtggcagcgaagcgggct
gccatactggaagcggcgttaaccttcttctcacagtttggtattcacggcaccagcctt
gataaggtggccgagctggccgatgtctctaaaaccaacctgctctactattttccctct
aaagaagtgctctacgtggcggtgctgaaacagattctggatgtctggctggcaccattg
cgcgcgctggcgcacgatcaggatccgctggtggccatccggcgttacatccggctaaag
ctggaagtgtcacgcgatcatcctcaggcttcccggctgttctgcctggagatgctgcag
ggcgcacccttgctgaaaggggaactggcgggcgatctcaagcaactggtggatgacaaa
gcggctattattgaacgctggattgatgaaggacggctggcgggcgtacagccacagcac
ctgatctttatgctgtgggccaccacgcaacattacgccgactttgccacccaggttgag
gccgtgactggtcagacgctcagcgatccggcgtttttcgatcagaccgtcgaaaacgtc
cagcgcatgatcattgaagggattcgcgtacgctaa
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