Pantoea vagans C9-1: Pvag_0937
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Entry
Pvag_0937 CDS
T01326
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Pvag_0937 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pva03016
]
Pvag_0937 (trmU)
Enzymes [BR:
pva01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Pvag_0937 (trmU)
Transfer RNA biogenesis [BR:
pva03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Pvag_0937 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
Asn_synthase
QueC
DUF7411
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ADO09131
LinkDB
All DBs
Position
complement(985497..986609)
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AA seq
370 aa
AA seq
DB search
MSDNSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAADDLADAQ
AVCDKLGMKLHKVNFAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL
GADFIATGHYVRRKDVDGQSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKPEVR
RIAEQLDLITAKKKDSTGICFIGERKFRDFLARYLPAQPGEIETTEGQIVGEHQGLMYHT
LGQRKGLGIGGLKESKDDPWYVVDKDVARNRLIVAQGGDHPRLMSVGLIAQQLHWVDRQP
ITAPLRCTVKTRYRQTDIPCEIIPQGDDRIEVRFDEPVAAVTPGQSAVFYLGDVCLGGGI
IEQRLPLVAE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacagccagaaaaaagtgatcgtcggtatgtccggcggcgttgattcttcc
gtttccgcctggttactgcagcagcagggctaccaggttgaaggcctgttcatgaagaac
tgggaggaggacgatggcgaggagtattgtaccgccgcggacgatctggcggatgcgcag
gctgtgtgcgacaagctcggtatgaagctgcataaagttaactttgccgcagagtactgg
gataacgtctttgagcatttcctcgaagagtacaaagcgggccgcacgcctaaccccgat
atcctctgcaataaagagatcaaattcaaagcgttcctggagttcgcagcggaagacctg
ggcgcagatttcatcgccacgggtcactacgtgcgccgcaaggacgtcgatggtcagagc
cagctgttacgcggactggatggtaacaaagaccagagctacttcctctataccctgagc
cacgagcagattgcccagagtctgttcccggtcggcgagctggaaaaaccggaagtgcgc
cgcattgcggaacaactggacctgatcaccgcgaagaaaaaagactcgaccggcatctgc
tttatcggcgagcgcaaattccgcgacttccttgcacgctatctcccggctcagcctggc
gaaatagaaaccacggaaggccagatcgtcggtgaacatcagggcctgatgtaccatact
ctgggacagcgtaaaggtctcggtatcggcggcctgaaagagagcaaagatgatccctgg
tatgtggttgacaaagatgtggcgcgtaaccgtctgattgtcgcccagggcggcgatcat
ccgcgtctgatgtccgttggcctgattgcgcagcagctgcactgggttgatcgtcagccg
attaccgccccactgcgctgcactgtgaaaacccgctatcgtcagaccgacattccctgt
gagattattccacagggcgacgatcggatagaagtgcgtttcgacgagccggtggctgcg
gtcacgccaggtcagtctgcggtgttttaccttggcgatgtctgcctcggtggcggtatt
atcgaacagcgcctgccgttagtggcggagtaa
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