KEGG   Pantoea vagans C9-1: Pvag_1042
Entry
Pvag_1042         CDS       T01326                                 
Symbol
clpV
Name
(GenBank) Putative type VI secretion system, core protein ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
pva  Pantoea vagans C9-1
Pathway
pva03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pva00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pvag_1042 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pva02044]
    Pvag_1042 (clpV)
Secretion system [BR:pva02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pvag_1042 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 Clp_N AAA_16 AAA_22 NBD_SMAX1 nSTAND3 Sigma54_activat AAA_7 AAA_25 AAA_18 NACHT Zeta_toxin AAA_14 T2SSE IstB_IS21 DUF815 Rad17 SRP54 AAA_33
Other DBs
NCBI-ProteinID: ADO09235
LinkDB
Position
1095764..1098373
AA seq 869 aa
MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVITHF
SLDEKALTQDIVAALDRLPRGASAVSDLSEHIDSAVERAWVYASLKYGATRIRGGHLLIG
MLKTFNLASVLKGISGQFSRVNADALLEQFDTLLSNSKEAQQALIAPVDAAGAPPAASGS
TLEQYGQDLTARARNGRIDPVTGRDDEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGL
ALRIAAGDVPAPLRDVQLWLLDIGLLQAGAGMKGEFEARLQALINEVQSSPTPIVLFVDE
IHTLVGAGGQQGTGDAANLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVQ
EPDEAKAILMLRSTVSALEKHHRVLLLDDAVSAAVKLSHRYIPARQLPDKAVALLDTACA
RVAVSQGAQPAALEDCLHRLAALEIEAEIIEREIKVGLGDVTRQQAIAAERTALEAERDA
LQQRWLQERELVETLIALRARCVTEEDAALREQRDATQQQLTALQGDTPLLFAAVDAGVV
AAVVSDWTGIPLGRMVKNEIDAVLNLADTLNQRVIGQRHGLELIAKRVRTTRARLDNPNK
PAGVFMLCGPSGVGKTETALALAESLYGGEQNIITINMSEFQEAHTVSTLKGAPPGYVGY
GEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRNTIIIL
TSNVGTQLISAMCADPELMPDPDALSTALRKPLLEVFPPALLGRLLVVPYYPLSDDMLAE
IVRLQLARIVRRLADNHGIDAQIDESVISQIVQRCTEVESGGRMVDAILTNTLLPQMSQI
LLSAHARDERYRRVEVRCEQGEFVCQFAV
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgtcagaaatcagccgtgccgtgctattcggcaaactggatacgctgttatttacctcg
ctggaaagcgccaccgccttttgcaaactgcgcggcaatccctatgttgaactggtgcac
tggctgcatcagctgatgcagcagcaggatggcgacttacagcaggtcatcacacatttt
tcactggatgaaaaggccctgactcaggacatcgttgccgcgctggatcgcctgccgcgc
ggtgccagtgcggtctccgacctctctgagcatatcgacagcgccgtggagcgggcatgg
gtttacgcctcgctgaaatatggcgcgacccgcattcgcggtggccatctgctgatcggc
atgctgaaaactttcaacctggccagcgtactgaaaggcatctccggccagttcagtcgc
gtcaacgccgatgcgctgctggagcagttcgacacgctgctcagcaacagcaaagaagcg
cagcaggcgctgatcgcaccggtggatgccgctggcgcaccgcctgcggccagcggcagc
acgctggagcagtacgggcaggacctgactgcgcgcgcacgtaacggccgcatcgatccg
gtgaccggccgtgacgatgagatccgccagatggtggatattctgatgcgtcgtcgtcag
aacaacccgctgctgaccggcgaagcaggtgtcggcaaaaccgcggtggtcgaaggtctc
gcgctgcgtatcgcggcgggcgatgtgcctgcgccgctgcgcgatgtgcagctctggctg
ctggatatcggcctgctgcaggcgggtgccgggatgaaaggggagttcgaagcacggctg
caggcgctgatcaatgaggtgcagtccagcccgacgccgattgtgctatttgtggatgag
atccacaccctggtcggcgcgggaggtcagcagggcaccggcgatgccgccaacctgctg
aaaccggcgctggcgcgcggccagctgcgcaccatcggcgcgactacctgggccgaatat
aaaaagtacatcgagaaagacccggcgctgacccgtcgcttccagaccgtgcaggtgcag
gagccggatgaagccaaagcgattctgatgctgcgcagcaccgtcagcgcgctggagaaa
caccaccgggtgctgctgctggatgatgcggtcagtgcggcggtgaaactgtcgcatcgc
tacattccggcgcgtcagttgccggacaaagcggtggcgctgctggataccgcctgcgcc
cgcgtggcggtcagtcagggcgcacagcctgcggcgctggaggattgcctgcaccgtctg
gccgcgctggagattgaagcggagatcattgaacgcgaaattaaggtcggcctcggtgac
gtcacccgccagcaggcgattgccgcagagcgcactgccctggaagctgaacgcgatgcg
ctgcaacagcgctggctgcaggagcgcgaactggtcgagaccctgattgcgctgcgtgcc
cgctgtgttaccgaagaggatgcggcgctgcgtgaacagcgtgatgcaacgcagcagcaa
ctcactgcgctgcagggcgacacgccgctactgtttgccgccgtcgatgcgggcgtggta
gcggccgtggtgtcggactggaccggtattccgctgggccggatggtgaagaatgagatc
gacgccgtcctgaatctggctgacaccctgaaccagcgcgtcatcggtcagcgtcacggt
ctggagctgatcgcgaagcgggttcgcaccacacgcgcgcgcctcgataaccccaacaaa
cccgcaggcgtctttatgctgtgcggtccgtccggtgtagggaaaaccgagaccgcactg
gcgctggccgagtcactgtatggcggtgagcagaatatcattaccatcaacatgagcgag
tttcaggaagcgcacaccgtctcgacgctgaaaggcgcaccgccgggctacgtcggttac
ggcgagggcggcgtgctgaccgaagccgttcgccgtcgtccctatagcgtggtgctgctg
gatgagattgagaaagcccatccggatgtgcatgagctgttcttccaggtgttcgacaaa
ggctggatggaggatggcgaaggccgccacatcgatttccgcaacaccatcattattctg
acctcgaacgtcggcacgcagttgatcagcgcgatgtgcgccgatcctgaactgatgccg
gatcccgatgccctgagtaccgcactgcgtaagccgctgctggaggtattcccgcctgcg
ctgctgggccgtctgctggtggtgccctattacccgctcagcgatgacatgctggcggag
atcgtgcggctgcagctggcgcgcattgtgcgccgtctggccgacaaccacggcattgac
gcgcagatcgacgagtcggtgatcagccagatcgtgcagcgctgcaccgaggtggagtcg
ggcggtcgcatggtcgatgccatcctcaccaacacgctgttgccgcagatgagccagata
ctgctgagcgcccacgcccgcgatgaacgctatcgccgcgttgaggtgcgttgtgagcag
ggcgaatttgtctgccagttcgctgtttaa

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