KEGG   Pantoea vagans C9-1: Pvag_1088
Entry
Pvag_1088         CDS       T01326                                 
Name
(GenBank) Putative type VI secretion system, core protein
  KO
K11891  type VI secretion system protein ImpL
Organism
pva  Pantoea vagans C9-1
Pathway
pva03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pva00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pvag_1088
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pva02044]
    Pvag_1088
Secretion system [BR:pva02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pvag_1088
SSDB
Motif
Pfam: IcmF-related_N IcmF-related
Other DBs
NCBI-ProteinID: ADO09281
LinkDB
Position
complement(1148140..1150254)
AA seq 704 aa
MRASLRLLLTHRLLWSFIGVTALSCLVWMLGPFWTWGESRPLEPVLPRQLTVSALYFLWI
LFQLIPSLYRAWFNSRLLTQLQLAGNDDPAERQMTEERLNQRFSDAAMQLKRTQFGRRHS
GNLLSRFNANYLYQLPWYLVMGAPGAGKTTALFNAGLDFPLTDTLGKQAIRGVGGTRNCD
WWFTDSAVLIDTAGRYALQESQRVRDAAEWHSFINLLKRYRTRQPINGVIMTISVADLLS
DSAEARFAQASALRERMAELHQQTGIHFPVYVMVTKTDLLKGFMSYFGNIDKARRDAIWG
FTFNRETGKPHKDDWHRHFGQQFQRLEEQLQQQLAEQMTQERDLNERAECFLFPQEFASL
RPLLNEYLDIVFSDHQDAVAWSPRGLFFTSGTQEGLPFDRVMGELSRKLQLRQAGEHSIA
AWDSVNRNSPIPGNKGQSFFIRDLLSDLIFKESGLAGSNRRWEYRNQLFHWIGYGVLAGA
LLIASSLWSISYYQNQHYLQQVAARVPAIREQSQQVIHQPADNIFDLLPFLNNLVKLPLS
ERFSLDNPPLTMRAGLYRGSQVSDAAWVLYQNALKSLLLPRVAQQITNILRNDPGDDNAY
SRNALRAYQMLYQPRNYDGEFLRAWLLQNLQRSLPDTVSARDLQQLDWHLSQLLDQQIQS
SPYARDNALMMRKLADNLKIAGQAGSVLAAAPLHPAARSHSLSE
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgcgcgcttcccttcgcctgctgttaacgcatcgcctgctgtggagctttattggcgtc
acggcgctgagctgtctggtctggatgctgggcccgttctggacatggggcgagtcgcgt
cctctggaaccggtgctccctcgccagctcaccgtgagcgcgctctattttctctggatc
ctgttccagctgatcccgtcgctttatcgtgcctggtttaacagccgcttactgacccag
cttcagctggcgggcaacgacgatccggcggaacgtcagatgactgaggagcggcttaat
cagcgcttcagcgacgcggcgatgcagctgaaacgcacccagtttggccgtcgtcacagc
ggcaatctgctctcgcgctttaatgccaattatctctaccagttgccctggtatctggtg
atgggtgcgcccggtgccggtaaaaccaccgcgctgtttaatgcgggcctcgatttcccg
ctgaccgatacgctgggtaaacaggcgattcgtggcgtcggcggcacccgcaactgcgac
tggtggtttaccgacagcgcagtgctgattgataccgcggggcggtatgcgctgcaggag
agccagcgcgtgcgcgatgccgcggagtggcacagttttatcaatctgctgaaacgctat
cgcacccgccagccgattaacggtgtcatcatgacgatcagcgtggccgatctgctgagc
gattctgccgaagcgcgttttgcccaggccagcgcgctgcgtgagcgtatggcggaactg
catcagcagaccggtattcacttcccggtctatgtgatggtcaccaaaaccgatttgctg
aaaggcttcatgagctactttggcaacatcgataaagcgcggcgtgacgctatctggggc
tttacgtttaaccgtgagacgggcaagccgcacaaagatgactggcatcgtcattttggc
cagcagttccagcggctggaagagcagctacaacagcagctggcggagcagatgacccag
gagcgcgatctgaatgagcgcgctgaatgcttcctcttcccgcaggagttcgcctcactg
cgcccgctgctgaacgagtatctcgatatcgtcttctctgatcatcaggatgccgtcgcc
tggagcccgcgcggcctcttctttaccagcggtacgcaggaaggcctgccgtttgatcgg
gtgatgggtgaactgagccgtaaactgcagttacgtcaggcgggcgaacattcgattgcc
gcctgggacagcgttaaccgcaacagtccgattcccggcaacaaaggccagagcttcttt
attcgtgacctgctgagcgatctgatctttaaagagagcggactggcgggcagtaatcgc
cgctgggagtatcgcaatcagctgttccactggattggctacggcgtgctggcaggcgcg
ctgctgattgcctccagcctgtggagcatcagctactaccagaatcagcactatctgcag
caggtggccgcacgggtgccggccattcgtgagcagagtcagcaggtgattcatcagcct
gctgataatatttttgatctgctaccctttctgaacaacctggtgaagctgccgctgtcg
gaacgtttttctctcgataatccgccgcttactatgcgggctggcttatatcgcggcagt
caggtcagcgacgccgcctgggtgctttatcaaaatgcgcttaagtctttgctgctgccg
cgcgtggcgcagcagatcaccaacattctgcgcaacgatccgggtgatgataacgcctac
agccgcaatgcgctgcgcgcctatcagatgctctatcagccgcgcaattacgatggcgaa
tttttacgggcctggctgctgcaaaacttacagcgctcgctgcccgatacggtcagtgcc
cgcgatctgcagcagctcgactggcacctgagccagctgctggatcagcagattcagtca
tcgccttatgcgcgtgacaatgcactgatgatgcgcaagctggcagacaatcttaaaatc
gcgggccaggcgggcagcgtgctggcggcagcaccgctgcacccggccgcgcgatcacac
tcgctaagcgagtaa

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