Pantoea vagans C9-1: Pvag_1415
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Entry
Pvag_1415 CDS
T01326
Symbol
ydcJ
Name
(GenBank) Uncharacterized protein ydcJ
KO
K25986
2-oxoadipate dioxygenase/decarboxylase [EC:
1.13.11.93
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00310
Lysine degradation
pva01100
Metabolic pathways
pva01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
Pvag_1415 (ydcJ)
Enzymes [BR:
pva01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.93 2-oxoadipate dioxygenase/decarboxylase
Pvag_1415 (ydcJ)
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GFIT
Motif
Pfam:
HGLS
DUF1403
Motif
Other DBs
NCBI-ProteinID:
ADO09605
LinkDB
All DBs
Position
complement(1489333..1490676)
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AA seq
447 aa
AA seq
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MDKFLSADLIRTRFSQAMSAMYQQEVPQYGTLMQLVATVNERTLEADIALKDRLTAADEI
GRLSLERHGAIRVGTADELATLRQLFAVMGMSPVGYYDLSQAGVPVHSTAFRPVTDAALR
RNPFRVFTSLLRPELIDDPALREKAAEILAARDIFTSRCRALLQLHEQRGGLTDAQATEF
VTEALETFRWHAHSSVDSQTYQALNQQHRLIADVVCFPGCHINHLTPRTLDIDRVQQLMP
SRGIDPKTLIEGPPRRQVPILLRQTSFKALEEPIIFKDGHQGTHTARFGEIEQRGAALTP
AGRALYDRLLSEAGSGQDNQQHQQHLAAIFRDFPDDETTLRQQGLAWFHYRLSEKGVATP
PDKGEALEDLIRQGRVLADPIVYEDFLPVSAAGIFQSNLGDRAQIRSAGQASRQAFEAAL
GSAVLDEMALYEERQQRSLAQCGIQTS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtttctcagtgcggatctcatccgcacccgtttctctcaggcgatgtcagcg
atgtatcagcaggaggtgccgcaatatggcacgctgatgcagctggtcgccaccgtcaac
gagcgtacgctggaagccgatatcgcgctcaaagatcgtctcaccgccgcggatgaaatt
ggccggctcagccttgaacgtcacggcgcaatccgcgttggcacggcagacgaattagct
acgctgcggcagctgtttgcggtgatggggatgtccccggtaggctattacgatctctct
caggcgggtgtgccggtgcactccacggcgttccggccagtcaccgatgcggcgcttcgg
cgcaatcctttccgggtctttacctcgctgttacgtcctgaactgattgacgatcccgcg
ctgcgcgaaaaggcggcagagatcctggccgcacgcgacattttcacttcccgttgtcgg
gcgctgctgcagttacatgagcagcggggcggattaactgacgctcaggctaccgaattt
gtgaccgaagcactggaaaccttccgctggcacgcccacagcagcgtggacagtcagacc
tatcaggcgctgaaccagcagcatcgcttgatcgcagatgtcgtctgctttcccggctgc
cacatcaaccatctcaccccgcgtacgctcgatatcgaccgcgtccagcaactgatgccg
tcgcgcggcatcgatccgaaaacgctgatcgaggggccgccgcgtcgtcaggtgccgatt
ctgctgcgccagaccagtttcaaagcgctggaggagccgatcatctttaaggacgggcat
cagggcacccacacagcgcgcttcggtgaaattgagcagcgcggcgcggcgctgacgcct
gcagggcgtgcgctctatgatcgactgctcagcgaggcgggcagcggtcaggacaatcag
cagcatcagcagcatctggcggccattttccgtgacttccccgacgacgagaccacacta
cgccagcaggggctggcctggttccactatcgcctgagtgaaaagggcgtcgcgacaccg
ccggataagggtgaagcgctggaggatctgatcaggcaggggcgtgtgctggcagacccg
atcgtctatgaggattttctgcccgtcagcgcggcagggatttttcagtccaacctcggc
gatcgggcgcagatccgttcggcgggacaggcgagccggcaggcgtttgaagcggcgctg
ggctctgcggtactggatgagatggcattgtacgaagagcgccagcagcgctcgctggca
cagtgcggaatacagacgtcctga
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