Pantoea vagans C9-1: Pvag_1923
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Entry
Pvag_1923 CDS
T01326
Symbol
oppf5
Name
(GenBank) putative ABC transport system ATP-binding protein oppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
pva
Pantoea vagans C9-1
Pathway
pva02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pvag_1923 (oppf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pva02000
]
Pvag_1923 (oppf5)
Transporters [BR:
pva02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pvag_1923 (oppf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
AAA_19
PRK
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADO10106
LinkDB
All DBs
Position
2014609..2015679
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AA seq
356 aa
AA seq
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MSSEYIIEVDALKKHFPIRDGLFGQETGQLRAVDGVSFRIRPGTIFGLVGESGSGKTTVG
RTLLGLYDKTAGTIKYRGQDLSTLTAREMQALRPKIQLVFQDPYSSLNPRMRIGDAIGEA
LLAHKLCTRAELYDRVIAVMKICGLAPQHYPRFPHEFSGGQRQRIGIARALILNPDFIVA
DEPISALDVSIQAQIINLFSDLRDDLGVTFLFISHDLGVVEHLCDDVAVMYLGQLVETAS
RDALFSQPLHPYTQALLAAVPTLDPQHEPTEVIKGEIPDPSHPPSGCRFSSRCPLAETQC
REAVPELREASPGHHVACHLVQQNRVGVSPDRATRFVKPATIGGHQGGPDRDIIQV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgaatacatcattgaagtggacgcgctgaagaagcacttcccgatacgcgac
ggcctgtttggtcaggaaaccgggcagcttcgtgccgttgacggtgtcagctttcgcatc
cgtccgggcaccatcttcggcctggtgggcgaatccggcagcggcaaaaccaccgtaggc
cgaacactgctggggttatatgataaaaccgctggcacgattaagtatcggggacaggac
ctgtcgacgctgacggcgcgggaaatgcaggcgctgcgtcccaaaatccagctggtgttt
caggatccctacagctctctcaatccgcgtatgcgtatcggcgatgcgattggtgaggcg
ttactggcacacaaactctgcacccgagcggagttgtacgacagggtaatcgcggtaatg
aagatttgtgggctggctccgcagcattacccgcgtttcccgcacgaattctcgggggga
caacgccagcgcattggcattgcccgggcattgattctcaatccggactttattgtcgcc
gatgagcccatctcggcgctggatgtctccattcaggcgcagatcatcaacctgttttcc
gacctacgtgatgatctcggcgtcaccttcctgtttatttcgcatgacctcggcgtggtg
gaacatctttgcgatgacgtggcggtgatgtatctcgggcaactggtggaaactgccagc
cgcgacgccctgttcagtcagccactgcatccctacacgcaggcgctactggccgccgtt
ccgacgctcgacccacaacatgaacccaccgaggtgatcaagggggagattccggatccg
tcgcacccgccatccggctgccgcttctcgtcacgctgcccgctggcggaaacgcagtgc
cgcgaggcagtaccggaattacgtgaagcgtcgccagggcaccatgtagcgtgtcatttg
gtccagcaaaacagagtgggagtttcaccagacagagcaaccagatttgtgaaacccgca
actattggtggtcatcagggcggtcctgacagagatatcattcaggtttag
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