Pantoea vagans C9-1: Pvag_1947
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Entry
Pvag_1947 CDS
T01326
Symbol
ycjC
Name
(GenBank) Uncharacterized HTH-type transcriptional regulator ydcN
KO
K14056
HTH-type transcriptional regulator, repressor for puuD
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pva03000
]
Pvag_1947 (ycjC)
Transcription factors [BR:
pva03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pvag_1947 (ycjC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_2
HTH_3
HTH_31
HTH_19
HTH_26
MqsA_antitoxin
Cupin_3
HTH_37
AraC_binding
HTH_25
MannoseP_isomer
Death
MPI_cupin_dom
Motif
Other DBs
NCBI-ProteinID:
ADO10130
LinkDB
All DBs
Position
2040568..2041125
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AA seq
185 aa
AA seq
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MSDVTLAPGRRLAQIRQTMGLSQRRVAELAGLTHSAISTIEQDKVSPAVSTLQKLLKVYG
LSLSEFFSEPKPHAEPKVIVRASDLLEIGSQGVSLKLIDNGRAQRTLGMLLETYQPGAST
GEKLRHPGEETGTLLEGEITLVINGQQFHLSAGESYVIDTGLPHSFTNRAEIPCRIVSAH
TPANF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttacgctggcaccgggacgacggctggcgcagatccggcagacaatggga
ttgtcgcaacgtcgcgttgccgaactggccggactgacccacagcgccatcagcactatc
gagcaggataaggtcagcccggcggtcagcaccctgcagaagctgctgaaagtctatggg
ctttcactgtcggaattcttttcagaacccaaaccccacgcagagccaaaggtgattgtc
cgcgccagcgatctgctggaaattggcagccagggtgtgtcgctaaagctcatcgacaat
ggccgtgcgcagcgcacgctgggcatgctgctggaaacctatcaacccggcgccagcacc
ggcgagaagctgcgtcatccaggcgaagagaccggcacgctgctggaaggcgaaattacg
ctggtgattaacggtcagcagtttcatctctccgccggagagagctatgtgattgatacc
ggcttaccgcacagcttcaccaacagggctgaaatcccctgccgcattgtcagtgcccac
acgccagccaacttttag
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