Pantoea vagans C9-1: Pvag_1963
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Entry
Pvag_1963 CDS
T01326
Symbol
rfbF
Name
(GenBank) dTDP-rhamnosyl transferase
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
pva
Pantoea vagans C9-1
Pathway
pva02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pvag_1963 (rfbF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Pvag_1963 (rfbF)
Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
O-antigen repeat unit
Pvag_1963 (rfbF)
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Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_2
Glyco_trans_2_3
Antimicrobial12
Gag_FV_central
Motif
Other DBs
NCBI-ProteinID:
ADO10146
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Position
complement(2057889..2058638)
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AA seq
249 aa
AA seq
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MVEEHYSHIKLILCDSNLGIAAAHNIGINYAIENSYDYVLLMDQDSLPAKNMLSVLQEAM
KKCPKAAAVGPQFLDANNNVRSRFIQIRGLKVDKKLQPDVNGCVIVDHLISSGSLIAIEN
FKKIGLMEEELFIDYVDVEWALRARSKGFINYGVCNAHMIHSLGDDRVDFLSNSIAIHSP
LRHYYQARNALLLYKRNYIPLNWKVVDAFKLLVKMSIYIIASRHKSLELKMIFRGVMHGL
RGIHGRFSQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagagcattactcgcacattaaattaatcttgtgtgatagtaatctaggtata
gctgcggctcataatatagggataaattacgccattgaaaatagttacgactatgtttta
ttaatggatcaggatagtttgccagcaaaaaacatgctttctgttttacaggaagccatg
aaaaaatgcccaaaagctgcagctgtcggtccgcagttcttagatgctaataataatgtg
cgttcccgatttatccaaatcagaggtttgaaagtagataagaaattgcagccggatgtc
aatggatgcgtaattgtagatcatttaatttcttcaggttccttaatcgccattgagaat
tttaaaaaaattggcttaatggaagaggaactatttattgactatgtagatgttgaatgg
gcattaagagccagaagtaaaggtttcattaactacggggtctgcaatgcccacatgata
cattcattaggtgacgacagagttgacttcttaagtaactcaattgctatccattctccc
ttaagacactactatcaggctcgaaacgctttgctattatacaagcgtaattacatccct
ttaaactggaaggttgttgacgcatttaaattattagtgaagatgtccatttatattatt
gcatctcgacataagtcgctcgagttaaagatgatttttaggggagtaatgcatggttta
cgtggcatccacggaagattcagtcaataa
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