Pantoea vagans C9-1: Pvag_2365
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Entry
Pvag_2365 CDS
T01326
Symbol
yfiF
Name
(GenBank) hypothetical protein
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pva03009
]
Pvag_2365 (yfiF)
03016 Transfer RNA biogenesis [BR:
pva03016
]
Pvag_2365 (yfiF)
Ribosome biogenesis [BR:
pva03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pvag_2365 (yfiF)
Transfer RNA biogenesis [BR:
pva03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Pvag_2365 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ADO10538
UniProt:
E1SBD8
LinkDB
All DBs
Position
complement(2517630..2518814)
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AA seq
394 aa
AA seq
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MNDEYKGKSGKVKVMYVRGEDDKSARAPNPRTGKGGHSAARQDDNRRSSGPRTERTQEGG
RSAGRRSDDTGRSSSPRRDEGGRGAPRRSDDGAGRRNDRDDDSRGAYGSSDSPWRTVSRA
PSADRASSPESDKPDHGGISGKSFVDPEQIRRQRNEETRVYGENACQALFQSRPEAIVRA
WFVQEVTPRFREALRWLAANRKAYHVVEDAEITKASGTEHHGGVCFLIKKRMGMAVSEWL
SQANTKDCVLALEDVSNPHNLGAIMRSCAHFGVKGLLVNDASLLESGAAVRTAEGGAEHV
QAISGATFSEGLEAFRKAGYTIVTTSSHQGTPLAQAQLPEKMVLVLGQEREGLSDTAFKQ
GDMSLSIGGTGNVESLNVSVATGVLLAEWWRQNA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaatataaaggcaagagcggcaaagttaaggtgatgtacgtgcgtggcgag
gacgataaaagcgcgcgcgcgccgaatcctcgtacaggcaaaggtggtcactctgctgcc
cgccaggatgataatcgtcgttcatctggcccccgcactgaacgcactcaggaaggcggt
cgctccgctggtcgtcgtagtgatgacaccggtcgcagcagttcaccgcgtcgtgatgaa
ggcggacgtggcgcaccacgccgttcagacgatggcgcaggtcgccgcaacgatcgtgat
gatgacagccgcggcgcctatggcagcagcgattccccgtggcgcaccgtgtcacgcgca
ccatccgccgatcgtgcgtcatcgcctgagagcgataagccggatcacggcggcatcagc
ggcaagagcttcgtcgatcctgagcagatccgccgtcagcgtaatgaagagacccgcgtc
tatggcgagaacgcctgtcaggcgctgttccagagccgtccggaagcgattgttcgcgcc
tggttcgtgcaggaagtcacaccgcgtttccgcgaagcactgcgctggctggcggctaac
cgcaaagcctatcacgtggtagaagatgctgagatcaccaaagcatcaggtacagagcat
catggcggcgtctgcttcctgatcaaaaagcgtatgggcatggcggtgtctgaatggctg
agccaggcaaatacgaaagattgcgtactggcactggaagatgtcagcaacccgcataac
ctcggcgcaattatgcgcagctgcgcgcactttggcgtaaaaggtttgctggtgaatgac
gcttcactgctggagtcaggtgcagccgtgcgtaccgcagaaggcggcgctgagcatgtg
caggcgatcagcggcgcaaccttcagcgaaggtctggaagcgttccgtaaagcaggttac
accatcgtgaccacctccagccatcagggcacgccgctggcgcaggctcagctgccggag
aaaatggtgctggtgttaggccaggagcgtgaaggtctttctgacaccgcgttcaaacag
ggtgatatgagcctgtcgattggcggcaccggtaacgtggaaagcctcaacgtctctgtc
gcaaccggcgtactgctcgccgaatggtggcgtcagaacgcataa
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