Pantoea vagans C9-1: Pvag_2436
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Entry
Pvag_2436 CDS
T01326
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pva03021
]
Pvag_2436 (rpoS)
Transcription machinery [BR:
pva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pvag_2436 (rpoS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ADO10600
LinkDB
All DBs
Position
complement(2602488..2603480)
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AA seq
330 aa
AA seq
DB search
MSQNTLKVNELHENAEFDENGAEIFDEKALVENEASDSDVAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVFFARRALRGDIPSRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQAQGLNIEALFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaatacgctgaaagtaaacgagttacatgagaacgcggaattcgatgagaac
ggagctgaaatttttgacgagaaggcccttgttgaaaatgaagccagtgatagcgacgta
gcggaagaagagttgctatcacagggtgcgacgcagcgtgtattagatgcgacgcagctc
tatcttggggagattggctattctccgttgttaacggcagaggaagaagttttcttcgct
cgccgtgcattgcggggtgatatcccttcccgtcgtcgcatgatcgaaagtaacttacgc
ctggtggtgaaaatcgcccgtcgttacagcaatcgtggtttagcactgctggacctgatt
gaagaaggtaacctcggcctgattcgcgccgtagagaaatttgacccggagcgtgggttc
cgtttctcaacgtacgccacctggtggattcgtcagactattgaacgggcgatcatgaat
caaacccgtaccattcgtctgccgattcacattgttaaagaactgaatgtttatctgcgt
accgcgcgtgaactttcccacaagctcgaccatgagccaagtgcggaagagatcgccgag
cagcttgataaaccagttgatgacgtaagccgtatgttacgtctcaacgaacgcattacc
tcagttgatacgccattaggcggtgattctgaaaaagcgctgctggatattctggccgat
gagaaagataacggcccggaagacaccacgcaggacgatgatatgaaacaaagcatcgtc
aagtggctgttcgaactgaacgccaagcagcgtgaagtgctggcgcgtcgtttcggcctg
ttgggctatgaagcggcaacgcttgaggatgtgggtcgtgaaatcggcttaacccgtgag
cgtgtacgtcagattcaggttgaaggtttgcgccgtctgcgcgaaatcctgcaggcgcag
ggtctcaacattgaagcactgtttcgtgaataa
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