Pantoea vagans C9-1: Pvag_2442
Help
Entry
Pvag_2442 CDS
T01326
Symbol
ygbO
Name
(GenBank) putative hydrogenase subunit
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pva03016
]
Pvag_2442 (ygbO)
Enzymes [BR:
pva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Pvag_2442 (ygbO)
Transfer RNA biogenesis [BR:
pva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pvag_2442 (ygbO)
Prokaryotic type
Pvag_2442 (ygbO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADO10606
LinkDB
All DBs
Position
complement(2606374..2607474)
Genome browser
AA seq
366 aa
AA seq
DB search
MTLNYLHGTPTAVGVIKANPEDFVVVEDLGYSADGEGEHLLVRIRKVGANTRFVAEALAK
YLGIHQRDMSYAGMKDRHAVTEQTLCFRLPGNAMPDLRGFSLEGVDILQVVRHKRKLRIG
ALAGNAFRLVIRQISDRDAVETRLVQVRDAGAPNYFGEQRFGRGGNNLVMAEKWARNEII
IRDRNKRSLMLSAARSALFNQVTSARLQQQGSLTQVLNGDALQLTGRGSWFVAQPDELAE
SQRRVEQHALRITAPLPGRGQPGPQADALAFEQQALPGRGQPGPQADALAFEQQALADES
LLLGLIEREKVDAARRAMLVVPRDMQWGWWDDVTLELSFWLPAGSFATSVVRELLTQTDS
PDQPDE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgaattacctgcacggcacgcccacagccgtcggcgtgatcaaagccaatccg
gaagatttcgtggtggtggaagacctcgggtatagcgcggatggggaaggtgagcatctg
ctggtacgcatccgtaaagtcggggccaatacccgctttgtggcggaggcgctggctaag
tatcttggtattcatcagcgcgacatgagctatgccgggatgaaagaccgccatgcggtc
acggagcagaccctctgtttccgtctgccaggcaatgcgatgcccgatctgcgcggtttt
tcgcttgagggcgtcgatattttgcaggtggtgcgtcacaagcgtaagctgcgcatcggc
gcactggcgggaaatgcgttccggctggttatccgccagatcagcgaccgcgatgcggtt
gaaacgcgtctggtgcaggttcgcgatgcgggcgcgcccaactattttggtgaacagcga
tttggtcgcggcggcaataacctggtgatggcggagaagtgggcgcgcaatgagattatt
attcgcgaccgcaacaagcgcagcctgatgctctctgccgcacgcagtgcgctgtttaat
caggtgaccagcgcgcgtctgcaacagcagggcagcctgacgcaggtgctcaatggcgat
gctttgcagctgactggccgtggcagctggtttgtcgcccagcctgatgaactggcagag
tcacagcgccgggttgaacagcatgcgctgcgcattaccgcgccgctgccgggacgcggc
cagcctggcccgcaggctgacgcgctggcctttgaacagcaggcgctgccgggacgcggc
cagcctggcccgcaggctgacgcgctggcctttgaacagcaggcgctggcggatgagtcg
ctgctgctgggattgatcgaacgtgagaaggtcgatgctgcccgccgcgctatgctggtg
gtgccgcgcgatatgcagtggggctggtgggatgacgtcacgctggaactgtcgttctgg
ctgcctgcgggcagctttgccaccagcgtggtccgggagctgctgactcaaacggattcg
cccgatcagcctgatgagtaa
DBGET
integrated database retrieval system
