Pantoea vagans C9-1: Pvag_2443
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Entry
Pvag_2443 CDS
T01326
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00900
Terpenoid backbone biosynthesis
pva01100
Metabolic pathways
pva01110
Biosynthesis of secondary metabolites
Module
pva_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Pvag_2443 (ispF)
Enzymes [BR:
pva01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Pvag_2443 (ispF)
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GFIT
Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
ADO10607
LinkDB
All DBs
Position
complement(2607471..2607956)
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AA seq
161 aa
AA seq
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MMRIGHGFDVHAFGGEGPLVIGGVRIPFEHGFIAHSDGDVALHALTDALLGAVAMGDIGK
LFPDTDPAFKGADSRGLLREAWRRIEAKGYRIGNVDVTIIAQAPKMLPHVPQMRINIAED
LGCHMDAVNVKATTTEKLGFTGRGEGIACEAVALVLKADSQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtatcggtcacggttttgacgttcacgcctttggcggagaaggtccgttagtg
attggcggtgtgcggatcccgtttgaacacggttttatcgcccattcggatggcgatgtg
gcgctgcatgcgctgacggacgcgctgctgggcgcagtagcgatgggcgatatcggcaag
ctgtttcccgacaccgatccggcctttaaaggggcggacagccgcggcctgctgcgtgag
gcctggcgtcgtatcgaagccaaaggctatcgtatcggtaatgtcgacgtcacgattatt
gctcaggcaccgaaaatgctgccgcacgtgccacagatgcgtatcaacattgcagaagac
ttaggctgccacatggatgcagtcaacgtcaaagcgaccaccaccgagaagctcggcttt
accggacgcggcgaaggcatcgcctgtgaagcggtcgcgttagtcctgaaagctgacagc
caatga
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