Pantoea vagans C9-1: Pvag_2495
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Entry
Pvag_2495 CDS
T01326
Symbol
recC
Name
(GenBank) Exonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pvag_2495 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pva03400
]
Pvag_2495 (recC)
Enzymes [BR:
pva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Pvag_2495 (recC)
DNA repair and recombination proteins [BR:
pva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pvag_2495 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADO10656
LinkDB
All DBs
Position
complement(2666129..2669506)
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AA seq
1125 aa
AA seq
DB search
MFHVYHSNQLDVLKILAAAVIKHDPLDDPFASEMVLVQSPGMAQWLQMELAQTFGIAANI
EFPLPASFIWEMFVRVLPDIPVESAFSKASMGWKLMHRLPVMLEQEEFISLRHYLHDDGD
KRKLYQLSSRVADLFDQYLVYRADWLNSWERGETIDGLGEAQRWQAALWRDLVSYTQALR
QPEWHRANLYSRFIQTLEQAKTTPENLPKRVFICGISALPPVYLQALQALGRHIDIHLLF
TNPCRDYWGDIQDYAFLAKLQSRQRRRHGADESRGLFRDAEQAPALFNDAGEQQLTNPLL
ASWGKLGRDNLFLLSQMESNDDIDAFVDVEPDNLLHCMQHDLLNLQDNAVIGLNAAELAH
SDQKRCLDPEDRSIAVQVCHSAQREVEVLQDHLLAMMEADPTLKARDIIVMVADIDAYAP
FIQAVFANAPADRYLPFAISDRRASQAHPAIVAFLNLLALPDSRFVSEDVLALLDVPALA
AHFSIDESGLRLLRRWVSESGVRWGLDDASVEALSLPITGQHTWRFGLQRMLLGYAMESH
NGDWEGILPYDESSGLVGELAGHLAELLSRLNHWRQLLAEPRPLVAWLPLCRELLNAFFS
PDAETEAALLLVEEQWQQLIEYGMDARFEEAIPVALLRDDLRSRLDQQRISQRFLAGQIN
FCTLMPMRSIPFQLVCLLGMNDGVYPRTLAPLGFDLMQQQSRKGDRSRRDDDRYLFLEAM
ISAQQQLYISYIGRAIQDNTERYPSVLVTELLDYIGQSFYLEGDGHLELDESAERVRMHL
QHLHSRMPFAAENFQPAARLQSFAREWLPAAQGAGQPQPDFVQPLEAPLIDALTLEAFLR
FWRHPVRAWFHQRLGVSFWLEENELPDSEPFALDNLERYQINAQLLNALVEGEDTQRLYA
HHRAAGNLPYGAFGELFWQAQRDEMQEVAAEVVTQRSDGESWEVNLQLEQVSLTGWLTQV
QSDGLLRWRPGVLNMNDGLLLWLEHLVYCALGGTGSSRMFGRQQSRWCFLAVPQAEAIAA
LNEYVAGYLAGMRQPLMLLNKSGGAWLTASYDKKSQQLLTDEATQLKARNRLLTAWQGNY
QVEGEGGDPYLQRLCRVLDEPQLQQITEAAQRWYLPVLAAHQDDE
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacgtttatcactcaaatcagcttgatgtgctgaagattctggcggcggcggtg
attaaacatgatcctcttgatgatcctttcgcctcagaaatggtgctggtgcagagcccc
ggaatggcgcaatggctgcagatggagctggcgcaaacctttggcattgcggccaatatc
gaattcccgctgcctgccagttttatctgggagatgttcgtccgcgtactgcccgatatc
ccggtagaaagtgctttcagcaaggccagcatgggctggaagctgatgcaccggctgccg
gtgatgctcgaacaggaagagtttatctctttacgccactatctccatgacgacggcgac
aagcgaaaactgtatcagctcagttcacgcgtggccgatctgttcgaccagtatctggtt
tatcgtgccgactggctcaacagctgggagcgtggcgaaaccattgacggactgggcgaa
gcgcagcgctggcaggccgcactgtggcgcgatctggtaagttatacccaggcgctgcgc
cagcccgaatggcaccgtgccaacctctattcgcgatttatccagacgctggagcaggcg
aaaactacgccggaaaatctgccgaaacgggtcttcatctgtggtatctctgcgctgccg
ccggtctatctgcaggcgttgcaggcgctgggacgacacatcgacatccatctgctgttc
accaatccctgccgcgactactggggcgacatccaggactatgcgtttctggcgaaactg
cagagccgtcagcgccgacgtcatggtgccgatgaatcacgcggacttttccgggatgca
gagcaggctccggcgctgtttaacgacgctggtgaacagcagctcactaacccgctgctt
gcctcatggggcaagctggggcgcgataacctgtttctgctcagtcagatggagtcaaac
gacgatattgatgcgtttgtggatgtggagccagataacctgctgcactgcatgcagcac
gatcttctcaacctgcaggataacgccgtcatcgggctgaatgcggcggaactggcgcac
agcgatcagaagcgctgtctggatccggaggaccgctccattgcggttcaggtctgccac
agcgcccagcgtgaagtcgaagtattgcaggatcatctgctggcgatgatggaggccgat
ccgacgctgaaagcgcgtgacattatcgtcatggtggccgatatcgacgcctacgcgccg
tttattcaggcagtgttcgccaacgcacccgccgatcgctacctgccgtttgcgatttca
gaccggcgggccagtcaggcgcatccggccattgtggcatttctgaatctgctggcattg
ccggacagccgttttgtctcagaggatgttctggcgctgctggatgttccggcgctggct
gctcacttctctattgatgaaagtggcctgcgcttactccggcgctgggtcagcgaatcg
ggtgtgcgctgggggctggatgatgccagcgtagaagcgctgtcacttccgattaccggc
cagcacacctggcgctttggcctgcagcgtatgctgctgggctatgcaatggagagccac
aacggtgactgggaagggattctgccttatgacgagtcgagtggtctggtgggggaactg
gcgggacatctggctgagctgctctcccggcttaatcactggcgacagctgctggccgaa
ccccgtccgctggtcgcctggctgccactgtgccgggaattgctgaacgcctttttcagc
cccgatgcagaaaccgaggctgccctgctgctggtggaagagcagtggcagcaattaatc
gaatatgggatggatgcacgctttgaagaggcgattccggtggcgctgctgcgcgatgat
ctgcgtagccgccttgatcagcagcgcatcagccagcgttttctggccggacagattaac
ttctgcaccctgatgccgatgcgctccattccttttcaactggtttgtctgcttggcatg
aacgacggcgtttatccccggaccctggcaccgttgggctttgacctgatgcagcagcag
tcccgcaaaggcgaccgcagccgccgtgatgatgatcgctatctcttcctggaggcgatg
atttcggcacagcagcagctctacatcagttatatcggccgggcgattcaggataatacg
gaacgctacccgtcggtgctggtcacagaactgctggattacattggacagagtttttat
ctggagggcgacggtcatcttgagctggatgaaagtgccgaacgggtgcggatgcacctg
cagcacctgcacagccggatgccctttgctgcagagaacttccagccggctgccagattg
cagagttttgcccgtgagtggctgcctgcggcgcagggagcagggcagccgcaacccgat
tttgttcagccgctggaagcgccgttaattgatgcgctgacgctggaagcgtttctgcgt
ttctggcggcatccggtccgcgcctggttccaccagcggctcggcgtgagtttctggctg
gaggagaacgaactgcccgacagcgagccgtttgcgctcgacaacctggagcgttaccag
atcaacgcgcagctgctgaatgccctggtcgaaggcgaggacacccagcggctttatgcg
caccatcgcgcggccggtaatctgccttacggcgcgttcggtgagctgttctggcaggcg
cagcgtgatgagatgcaggaagtggctgctgaagtggtcactcagcgcagtgatggcgag
agctgggaagtaaacctgcagctggagcaggtcagcttaaccggctggctgacgcaggtg
cagagtgacggattactgcgctggcggccgggcgtgctcaatatgaacgacggactgtta
ctctggctggagcatctggtctactgcgcgctgggcggcaccggcagcagccggatgttt
ggccggcagcagagccgctggtgtttcctcgccgtaccgcaggctgaggcgatcgctgcg
ctgaatgaatatgtcgcaggctatctcgccggtatgcgccagccgctgatgctgcttaac
aagagtggcggcgcgtggctgaccgccagctatgacaaaaaaagccagcagttgctgacc
gatgaagcgacgcagctcaaagcgcgtaatcgactgctgaccgcctggcagggtaactat
caggtcgagggcgagggcggcgatccctatctgcagcgtctttgccgtgtgctggatgag
ccacaactgcagcagataactgaggcggcacagcgctggtatttaccggtgctggctgca
catcaggatgatgaatag
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