Pantoea vagans C9-1: Pvag_2503
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Entry
Pvag_2503 CDS
T01326
Symbol
ygdP
Name
(GenBank) putative invasion protein
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pva
Pantoea vagans C9-1
Pathway
pva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pvag_2503 (ygdP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pva03019
]
Pvag_2503 (ygdP)
Messenger RNA biogenesis [BR:
pva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Pvag_2503 (ygdP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ADO10664
LinkDB
All DBs
Position
complement(2675549..2676076)
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRFGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
HRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNDADINVQHSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFAGVVMSMQESAGQRNNPAHRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaaccggcaggga
caagtgttatgggccaggcgctttggacagcactcctggcaatttcctcagggaggcatc
aatcccggtgaaaccgcagaacaggcgatgtatcgcgaactgttcgaagaggtcggatta
caccggaaagatgttcgaatacttgcctctacccgtaactggttgcgttacaagttgcca
aaacgtttggtgcgttgggacacaaagccggtatgtatcggccagaaacaaaagtggttt
cttctgcagttaatgtgtaatgacgcggatatcaatgtgcagcacagcagcacgccggaa
tttgacggctggcgctgggtcagtttctggtatccggtgcgtcaggttgtctcctttaag
cgcgatgtctatcgtcgggtaatgaaggaattcgctggcgtggtgatgtctatgcaggag
agtgcggggcagcgaaataatcctgcccatcgacgtaagagaggatag
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