Pantoea vagans C9-1: Pvag_2556
Help
Entry
Pvag_2556 CDS
T01326
Symbol
rfaL
Name
(GenBank) O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00540
Lipopolysaccharide biosynthesis
pva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pvag_2556 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Pvag_2556 (rfaL)
Enzymes [BR:
pva01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
Pvag_2556 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Core region
Pvag_2556 (rfaL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
ADO10717
LinkDB
All DBs
Position
complement(2729937..2731205)
Genome browser
AA seq
422 aa
AA seq
DB search
MTNKSSRNGLTLMVNASVIALCLALSLNMFVSGLPQKIFYLVSYLSVASVLYGLVRRRVA
FKENGFYVVLFAVLILFALIRLFWAIHTKGLETAPSNDAITNIANYLLGAKRLLLGAFVL
LSLAIYGNRVSATTLRIGKVLILVGLLITLGFGIHEHLYTENIRIKLTTEAASMSSYMIL
FIYCTWLWLSRYETHSYWKIADITVLAVTFALLYLCGTRVTLIALIAVGLLFLLQTYRLS
LLTNWRISALLVGVLAVLILMTSNRWVEGMQDIENYGSNSSTSLGARVAIWGGAVNFIEH
HGGFATPDARTTEAREFIMAHYPLNGEGYTNVKYNMHNEFLEVTTLQGWLGALSLALLYL
AVPGGWLKKCDLRGVALPMLALFICGLTDSVLPYNQTATIFIMALALCCIRQPLPAGRVS
TL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaaagcagtcgtaatggattaacgttaatggttaatgcttcagttattgcg
ctctgtctggcgctgtcactgaatatgtttgtttccggcctgccgcaaaaaatattttat
ctggtctcttatctctccgtcgcatctgtgttgtatggcctggtgcgcaggcgagtggcg
tttaaagagaacggtttttatgtcgtcctgtttgctgtgctgattctcttcgctctgatc
cgtctgttctgggcgatacacacaaaggggcttgaaaccgcaccctcaaacgatgccatc
accaatatcgccaactatctgctgggggcgaagcggctgttgctgggagcctttgtgctg
ctcagtctggcgatttatggcaaccgggtctctgcaaccacgctgcgcattggaaaagtg
ttaattctggtcggtctgctgattacgctgggctttggtattcatgagcatctctatacc
gagaatatccgcatcaagctcaccaccgaagcggcctcgatgtcctcctacatgattctg
tttatctactgcacatggctgtggctgagccgttacgagacgcactcatactggaagatt
gccgatatcactgtgctggctgtgacctttgccttgctctacctgtgcggcacccgcgta
acgctgattgcactgattgccgtggggctgctgttcctgttgcagacctaccggctgtcg
ctgctgaccaactggcgaatcagcgcattactggtgggcgtgctggcggtgctgatcctg
atgaccagtaaccgctgggtagaggggatgcaggacattgaaaactacgggtcaaacagc
tcgacctcgctgggcgcacgcgtggctatctggggcggggcggtcaactttattgagcat
catggcggttttgccacgccggatgcacgcaccacggaggcgcgggagttcatcatggcg
cactatccgcttaatggtgaaggctacaccaacgttaagtacaacatgcacaacgagttt
ctggaagtgacgacgctgcagggctggctgggcgcgctgtcgctggcgctgctctatctg
gctgtgcctggcggctggcttaagaagtgcgatctgcgcggcgtggcgctgccaatgctg
gcactgtttatctgcggactgaccgattcagtactgccgtataatcagacagccactatt
ttcattatggcgctggcgctctgctgcatacggcagccattgccggcagggcgggttagc
acgctttaa
DBGET
integrated database retrieval system
