Pantoea vagans C9-1: Pvag_3085
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Entry
Pvag_3085 CDS
T01326
Symbol
yjjM
Name
(GenBank) Uncharacterized protein yjjM
KO
K23015
GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pva03000
]
Pvag_3085 (yjjM)
Transcription factors [BR:
pva03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Pvag_3085 (yjjM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
HTH_Crp_2
HTH_DeoR
HTH_11
HVO_A0261_N
DUF8612
Phage_rep_O
HTH_IclR
HTH_23
HTH_5
MarR_2
Med15_N
TrmB
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADO11234
LinkDB
All DBs
Position
3253223..3254125
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AA seq
300 aa
AA seq
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MSRSQNLRQNVINQMLESIAQRHICSPLPPQAALAEMFNISRTTVRHTLHYLHQCGVLDK
VDQTYVIVRDPREEDGFSALTPPIEQQASHFEQMFFNMINQRQLVPGDTFSELQLAQQVK
VSPVVVREFLLRFMRYDLLEPVKRGQWRMKKFTQDYAEKLFELREMLETHALSRFLNLPA
SDERWVQARDLLDRHRSMRDTIASNYRHFAALDRQMHSLILSAANNPFFNQSLEIISVIF
HSHYQWDESDLKQRNIVALEEHMAILTALIGRQDIDALCALHNHLATAKTSMVRSIGQYN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagccagaatttgcgtcagaacgtgatcaaccagatgctggaaagtattgct
cagcgtcacatctgttcacccctgccgccgcaggccgcgctggccgagatgttcaatatc
agccgtaccacggtgcgtcataccctgcattatctgcatcagtgcggcgtgctggataaa
gtcgatcagacttacgttatcgtgcgcgatccgcgtgaagaagacggctttagcgcctta
acgccgccgattgagcagcaggccagccacttcgagcagatgttttttaatatgattaat
cagcggcagctggtgccgggcgacaccttcagcgagctgcaactggcgcagcaggtgaag
gtcagtccggtagtggtacgcgagtttctgctgcgctttatgcgctatgacctgctggag
ccggttaaacgtggtcagtggcgcatgaagaagttcactcaggattacgccgagaagctg
tttgagctgcgcgagatgctggaaacccacgccctgagccgcttcctcaatctgcccgcc
agcgatgaacgctgggtccaggcgcgggatctgctggatcgtcaccgatcgatgcgcgac
accattgccagcaactatcgccactttgccgcgctggaccgccagatgcattcgctgatt
ttatccgccgctaacaacccgtttttcaatcagtcgctggagataatctcggtgattttt
cattcgcattatcagtgggatgaaagcgatctcaagcagcgcaatattgtggcgctggag
gagcatatggcgattctcaccgctctgattggccgtcaggatatcgacgcgctctgcgcc
ttacataaccatctggcgaccgccaaaacctcgatggtgcgctcaattggtcagtacaat
taa
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