Pantoea vagans C9-1: Pvag_3126
Help
Entry
Pvag_3126 CDS
T01326
Symbol
yijC
Name
(GenBank) HTH-type transcriptional repressor fabR
KO
K22105
TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pva03000
]
Pvag_3126 (yijC)
Transcription factors [BR:
pva03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Pvag_3126 (yijC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_46
TetR_N
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
ADO11268
LinkDB
All DBs
Position
complement(3298243..3298890)
Genome browser
AA seq
215 aa
AA seq
DB search
MGVRAQQKERTRRTLIEAAFSQLSAERSFTSLSLREVAREAGIAPTSFYRHFKDVDELGL
TMVDESGLMLRQLMRQARQRIAKGGSIIKTSVATFMEFIGNNPNAFRLLLRERSGTSAAF
RAAVAREIQHFIAELADYLEVENRMPRSFTEAQAEAMVTIVFSAGAEALDVDAEQRRKLE
DRLVLQLRMIAKGAYYWYRREQERLAVTLEKPEEQ
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcagagcgcaacaaaaagaacgtacacgacgtacactgattgaagcagctttc
agtcagctcagcgccgaacgcagttttaccagtctgagtttgcgggaagttgcccgtgaa
gcgggaatagcacctacctctttttatcgtcattttaaggatgttgatgagcttggtctg
acgatggtggatgaaagcgggctgatgctgcgacagctgatgcgtcaggcgcgccagcgt
atcgccaaaggtggcagcatcattaaaacgtccgtggcgacctttatggagttcatcggc
aacaaccccaacgcttttcgcctgttactgcgtgaacgttccggtacctctgccgctttt
cgtgccgccgtggcgcgtgaaattcagcactttatcgctgaactggccgattatcttgag
gtcgaaaatcgcatgccgcgtagttttaccgaagcgcaggctgaagcgatggtgaccatt
gttttcagcgccggtgcagaagcactggatgttgatgctgagcagcgacgtaagcttgag
gatcggctggtgctgcagctgcgtatgatcgccaaaggtgcttattactggtatcgccgt
gagcaggaacgactggcggtcaccctggaaaaacccgaagagcaatga
DBGET
integrated database retrieval system
