Pantoea vagans C9-1: Pvag_3188
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Entry
Pvag_3188 CDS
T01326
Symbol
rfaQ
Name
(GenBank) putative lipopolysaccharide core biosynthesis protein
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00540
Lipopolysaccharide biosynthesis
pva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pvag_3188 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Pvag_3188 (rfaQ)
Enzymes [BR:
pva01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
Pvag_3188 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Core region
Pvag_3188 (rfaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
ADO11330
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All DBs
Position
3362660..3363736
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AA seq
358 aa
AA seq
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MASLIPANFSPKNILLIKLRHHGDMLLTTPAINALHERYPQASIDVLLYQETRPMLEAHP
AIRHLHVIDRKWKQEGTCRKLGHERALIRAVRDAHYDLVINLADQWRAAQITRLSAAPVR
IGFAYKKRDNVLWRWCHNCLVPTHNHSKLHTVEQNMSALAPLGISSDGARVSMHYSDADR
QIVLARLAEHHITAPYIVVQPTSRWGFKCWEEESVAATLDQLAQTGRKVVLTAGPDKQEL
AMINRIRALCVSKDVVSLAGQFTLPQLAALIDHARLFIGVDSAPMHMAAALETPCIALFG
PTKLQHWRPWGDNNQVIWAGDYGPLPSPDSIDTKTDQRYLSAIPVTDVVAAARSYLNE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctgattccagcaaacttctctccaaaaaatatattactgattaagctgcgc
catcatggtgacatgctgctcacaacgcccgccatcaatgcgcttcatgagcgttatccg
caggccagcatcgacgtattgctctatcaggaaacgcgtccgatgctggaagcgcatccg
gccatccgccatttgcacgtcatcgatcgcaaatggaagcaggagggcacctgccgcaag
ctgggccatgagcgtgcattaattcgcgccgtgcgcgacgcccattatgatctggtgatc
aatctggccgatcagtggcgcgctgcccagattacccgtctctctgcggcacccgttcgc
atcggttttgcctataaaaaacgcgataacgtgctgtggcgatggtgtcacaactgcctg
gtccccacacacaatcacagcaaactgcataccgttgagcagaatatgtcagcgctggcg
cccctcggcatcagcagcgatggcgcacgcgtctcaatgcactacagcgacgctgatcgg
caaatcgtgctggcccgactggcggaacatcatattaccgcgccctatattgtggtgcag
ccgacctcacgctggggctttaaatgctgggaagaggagagcgttgcagccacacttgat
cagctggcgcagacgggccgcaaagtggtgctgaccgccgggccggacaagcaggagctg
gcgatgattaaccgcattcgcgcgctctgtgtatcaaaggatgtggtttcgctggcgggt
cagttcacgctgccgcagctggcggcattgatcgatcatgcccgtctgtttattggcgtc
gactctgcgccgatgcatatggctgctgcgcttgaaaccccctgcattgcgctgtttggc
ccgaccaagttgcagcactggcggccctggggtgacaacaatcaggttatctgggcgggc
gattatggcccgctgccctcacccgattccatcgacaccaaaactgaccagcgttatctc
tcggccattccggtaacggatgtggtcgcggcagcgaggagctacctgaatgagtaa
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