Pantoea vagans C9-1: Pvag_3190
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Entry
Pvag_3190 CDS
T01326
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00540
Lipopolysaccharide biosynthesis
pva01100
Metabolic pathways
Module
pva_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pvag_3190 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Pvag_3190 (kdtA)
Enzymes [BR:
pva01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Pvag_3190 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Pvag_3190 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
Pvag_3190 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
Pvag_3190 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Lipid A
Pvag_3190 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
ADO11332
LinkDB
All DBs
Position
3364954..3366228
Genome browser
AA seq
424 aa
AA seq
DB search
MTTIYTALLYFIQPLIWLRLWLRGRKAPAYRKRWAERYGYCVGKVKPDGIVLHSVSVGET
LAAIPLVRALRHRYPTLPITVTTMTPTGSERAQSAFGKDVHHVYLPYDLPGSINRFLDTV
NPRLVIIMETELWPNIIRILHQRNIPLVIANARLSARSAKGYRKLGKFMRQLLQSITLIA
AQNTEDGDRFLSLGLKRSQLAITGSLKFDISVTPELAARAVTLRRQWAPRRPVWIATSTH
EGEEAIVLDTHRRLLQTFPDLLLILVPRHPERFNDARELTQERGFSFILRSSGEIPSGST
QVVIGDSMGELMLLYGIADLAFVGGSLVERGGHNPLEPAAHALPVLMGPHIWNFKDICSK
LQEGQGLITVTDVISLEKEVTNLLQDDDYRRYYGRHAVDVLHQNQGALQRLLQLLEPHLP
PRAH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatttacaccgcattgctctacttcattcagccactgatctggctgcgcctg
tggctgcgcggtcgtaaagcgcctgcctatcgcaaacgctgggcagaacgctatggctat
tgtgtcggcaaagtgaagcctgacggcattgtgctgcactcggtctctgtgggtgaaacg
ctggccgcgattccgctggtgcgcgcactgcgtcatcgttacccgaccctgccgattacc
gtcaccaccatgacgccaactggttctgagcgggcgcaatctgcttttggcaaagatgtg
catcacgtctatctgccttatgatctgccaggttcgattaatcgttttctggatacggtt
aatccacgactggtgatcatcatggaaacggagctgtggccgaacattatccgcattctg
caccagcgtaacattccgctggtgatcgccaatgcccgcctctcggcccgctccgccaaa
ggctatcgcaagctgggtaaatttatgcgccagctgttgcagagcatcacgctgattgca
gcacagaatacggaagatggcgaccgcttcctgagtctgggcctgaaacgttcacagctg
gcgattaccggcagcctgaagtttgatatttccgtgacgccagaactggccgccagagcg
gtaacactgcgtcgccagtgggcgccgcgtcgcccggtgtggattgccaccagcacgcac
gaaggcgaagaggccatcgtgctggatacccatcgtcgcctgctgcagacgtttccggat
ctgctgctgattctggttccccgccatcctgaacgctttaacgatgcgcgcgaactgacg
caggaacgcggcttcagctttatcctgcgcagcagcggtgagatcccttcgggttctacg
caggtggtcatcggcgactcaatgggtgaactgatgctgctttacggcatcgccgatctg
gcgtttgtcggcggcagcctggttgagcggggcggacacaacccgctggaacccgcggcc
catgcccttccggtgctgatggggcctcacatctggaacttcaaagatatctgcagcaag
ttgcaggaaggccagggtctgatcaccgtcaccgacgtgatttcactggaaaaagaggtc
accaacctgttacaggatgatgattatcgccgttattacggacgccatgcggtagacgta
ctgcaccagaaccagggtgcgcttcagcgtctgctacagttactcgaaccgcatctgcca
ccacgggctcactaa
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