Pantoea vagans C9-1: Pvag_3239
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Entry
Pvag_3239 CDS
T01326
Symbol
rbsr1
Name
(GenBank) rbsR; ribose operon repressor
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pva03000
]
Pvag_3239 (rbsr1)
Transcription factors [BR:
pva03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Pvag_3239 (rbsr1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_3
HTH_38
HTH_31
MerR
HTH_35
Motif
Other DBs
NCBI-ProteinID:
ADO11377
LinkDB
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Position
complement(3420333..3421355)
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AA seq
340 aa
AA seq
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MNFCSSRVKRLSTMKDVARLAGVSTSTVSHVINNNRFVSEGVREKVEQAIRHLNYAPSAL
ARSLKINQTHTIGMLLTTSSNPFYAEVVRGVEESCYQRGYSLILCNTAGDEERMNRSLET
LMQKRVDGLLIMCTESHLPSADILNRYPSIPAVMMDWAPFEGRGDIIQDNALLGGELATQ
HLIDSGYTRIACIAGPQDKTPARMRLEGYRNAMTKSGLEILPGYIVNGDFEFQGGYNGMV
ELLALETLPEAVFTSNDAMAVGVYHALYQAGMQVPQQMAVMGYDDIELARYLTPPLSTIH
QPKDALGELAIDTLIHRLSDPDASQQTLVLTPELVVRGSV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttgcagcagcagggttaagcgattgagtaccatgaaagatgtcgctcgcctg
gcgggcgtctctacctccactgtctcgcacgttattaataacaaccgctttgtcagtgaa
ggcgtgcgggaaaaagttgagcaggcgatacgtcatcttaactacgccccttctgcactg
gcgcgcagtctgaagatcaatcagacgcacaccatcggtatgctgctgaccaccagtagt
aaccccttttatgccgaagtggtgcggggcgtggaagagagctgttatcagcgtggctac
agcctgattctctgcaacacggcgggtgatgaggagcggatgaaccgcagcctggagacg
ctgatgcagaagcgcgtcgatggtttactgatcatgtgcactgaaagtcacctgccgtcg
gcagacatcctgaatcgttatccctctatacctgcggtgatgatggattgggcaccgttt
gaaggtcgcggtgacatcattcaggataacgcgttgctgggcggcgagctggccactcag
catcttatcgacagcggctatacccgcatcgcctgtatcgccggtccccaggataaaacc
ccggcccgtatgcgtctggaaggttatcgcaacgccatgactaagagtgggctggagatt
ttgcctggctatatcgtgaatggtgactttgaatttcagggtggctacaacgggatggtc
gagttgctggcgctggaaacgctgccggaagcagtatttaccagtaacgatgcgatggct
gtcggcgtttatcacgccctctatcaggctggcatgcaggttccgcagcagatggcggtc
atgggatatgacgatattgaactggcgcgctatctcactccgccactgagtacgattcac
cagcccaaagatgcgctgggcgaactggcgatagataccttaattcatcgtctcagcgat
cccgacgccagccagcaaacgctggtgctgacgccggagctggtggtacgtggctcagtt
tag
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