Pantoea vagans C9-1: Pvag_3306
Help
Entry
Pvag_3306 CDS
T01326
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pva03032
]
Pvag_3306 (gyrB)
03400 DNA repair and recombination proteins [BR:
pva03400
]
Pvag_3306 (gyrB)
Enzymes [BR:
pva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pvag_3306 (gyrB)
DNA replication proteins [BR:
pva03032
]
Prokaryotic type
DNA Topoisomerases
Pvag_3306 (gyrB)
DNA repair and recombination proteins [BR:
pva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pvag_3306 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
ADO11444
LinkDB
All DBs
Position
complement(3493014..3495422)
Genome browser
AA seq
802 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDIV
VTIHADNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELTIRREGKVHQQIYVHGVPEAPLAVTGDTDITGTRVRFWPSYETFTNVR
DFEYEILAKRLRELSFLNSGVSIRLEDKRDGKTDHFHYEGGIKAFVEYLNKNKTPIHPTV
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEI
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQIAIALDGATLHTNASAPALGGEPLETLVSDFNSTQKMIKRMERR
YPMAMLRAMIYHDTLSDLSNEAEVTTWLNGLVSYLTEREAHGSTYLAQVRENRELNLFEP
VLRVRTHGVDTDYPLEAEFVQGPEYRKICALGGKLRGLLEEDAYIERGERRQPVASFEQA
IEWLVKESRRGLSVQRYKGLGEMNPDQLWETTMDPDSRRMLRVTIKDAIGADQLFTTLMG
DAVEPRRAFIEENALKAANIDI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctcaagtattaaagtcctgaaaggacttgatgcggtacgc
aaacgcccgggcatgtatatcggcgataccgatgacggtaccggtctgcatcacatggta
ttcgaggtcgtggataacgcaatcgacgaagcgctcgctggtcactgtagtgacatcgta
gtcactatccatgcggataactccgtctcggtgcaggatgatggacgcggtattccaacc
ggtattcacgaagaagagggcgtttccgccgctgaagtgatcatgaccgtgctgcatgcg
ggcggtaagttcgacgataactcctataaagtctccggcggcctgcacggcgtgggcgtc
tctgtcgttaacgccctgtcgcagaagctggagctgaccattcgtcgcgaaggcaaagtc
catcagcagatttacgtccacggcgtacctgaggcaccgctggcggtcactggtgatacc
gacatcaccggtacccgcgtgcgtttctggccaagctatgaaacctttaccaacgtgcgc
gatttcgagtatgagattctggcaaaacgcctgcgcgaactgtcgttcctgaactcgggc
gtgtcgattcgcctggaagacaagcgtgatggcaaaaccgaccacttccattacgaaggc
ggtatcaaggcgtttgttgagtacctcaacaaaaacaaaactccgattcaccctaccgtg
ttctatttctctaccgagaaagatggcattggcgtggaagtggcgctgcagtggaacgac
ggcttccaggaaaatatttactgctttaccaacaacatcccgcagcgcgatggcggtacg
caccttgccggtttccgcgcagcgatgacgcgtaccctgaatgcctacatggataaagag
ggttacagcaagaaagccaaagtcagcgccaccggtgatgatgcgcgtgaaggcctgatc
gccgtggtttcggtaaaagtgccggatccaaaattctcctcacagaccaaagacaaactg
gtctcgtcagaggtgaaatcggcggttgagcagcagatgaatgaactgctggcagaatac
ctgctggaaaacccgtcagacgccaaaatcgtcgtgggcaaaattatcgatgccgcacgt
gcccgtgaagcagcacgccgcgcccgtgaaatgacccgccgtaaaggcgcgctggatctg
gctggtctgccaggtaagctggcggattgtcaggagcgtgacccggcgctctctgaaatc
tacctggtggagggtgactccgcaggcggctcggccaaacagggccgtaaccgtaaaaac
caggcgattctgccactgaaaggtaagatccttaacgttgagaaagcgcgtttcgacaaa
atgcttgcctcgcaggaagtggccacgctgatcaccgcactgggttgcggtattggtcgc
gatgagtacaacccggacaagctgcgctatcacagcatcatcatcatgaccgatgccgat
gtcgatggttcacacatccgaaccctgctgctgaccttcttctatcgtcagatgcctgaa
atcattgagcgcggccacgtctatatcgcccagccgccgctctacaaagtgaagaaaggc
aagcaggagcagtacatcaaagatgacgaggcgatggaccaataccagatcgctatcgcc
cttgatggtgcaacgctgcacaccaatgccagcgcgcctgcgctgggcggtgagccgctg
gagacgctggtctctgacttcaacagcacccagaagatgatcaagcgtatggaacgccgt
tatccgatggccatgctgcgtgcgatgatttatcacgacacgctgagcgacctgagcaac
gaagcagaggtcactacctggctgaacggcctggtgagctatctgacggagcgtgaagcg
cacggcagtacttatctggcacaggtgcgtgaaaaccgcgaactgaacctgttcgagccg
gtgctgcgcgtccgtacccacggtgtggataccgactatccgctggaagctgagtttgtt
cagggacctgagtaccgcaaaatctgtgctctgggtggcaaactgcgtggtctgctggaa
gaagatgcttacattgaacgtggtgagcgtcgtcagccggtggcaagcttcgaacaggcg
attgagtggctggtgaaagagtcgcgtcgtggcctgtcggtccagcgctataaaggtctg
ggcgagatgaacccggatcagctgtgggaaaccaccatggatccagacagccgtcgtatg
ctgcgcgtcactattaaagatgcgatcggtgctgaccagctgttcacgaccctgatgggc
gatgcggtcgagccgcgccgcgccttcatcgaagagaatgcgctgaaagcggccaatatc
gatatttaa
DBGET
integrated database retrieval system
