Pantoea vagans C9-1: Pvag_3408
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Entry
Pvag_3408 CDS
T01326
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva03420
Nucleotide excision repair
pva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pvag_3408 (uvrD)
03430 Mismatch repair
Pvag_3408 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pva03400
]
Pvag_3408 (uvrD)
Enzymes [BR:
pva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pvag_3408 (uvrD)
DNA repair and recombination proteins [BR:
pva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pvag_3408 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Pvag_3408 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
ADO11540
LinkDB
All DBs
Position
3613460..3615622
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AA seq
720 aa
AA seq
DB search
MDVSELLDGLNDNQRAAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKSMNLDDKQWPARQGMWYINGKKDEGLRPKHIESYGNPIEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNNIQYAWIRMLAGDS
GRVIIVGDDDQSIYGWRGAQVENIQRFLQDFPGAETIRLEQNYRSTNNILKAANALIANN
NGRLGKELWTEGSDGEPISIYCAFNELDEARFVVNRIKVWMENGGALNDCAILYRSNAQS
RVLEEALLQSSMPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGVGD
RTLDVVRQTARERQMTLWQATRELLQSRALAGRAASALQRFCELVDSLATETADLPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFSQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMLKLTLTYAETRRLYGKEVYHRPSRFIGELPETCIEEVRLRASVSRPVNHQRMG
APVTKNDSGFALGQRVHHAKFGEGTIINLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactgctcgatggtttgaatgacaatcagcgcgcggccgttgcggct
ccgcgcagtaacctgctggtgctggcaggcgcgggcagtggtaaaacgcgggtgctggtg
catcgcattgcgtggctgatgtcagtagagaactgctcaccctattcgattatggcggtg
acctttaccaataaagcagccgcggagatgcgtcaccgtatcgagcatctgatcggcacc
agccagggcgggatgtggatcgggactttccacggtctggcgcaccgtttactgcgcgcc
caccatcttgacgccggtctgccgcaggattttcagatcctcgacagcgaagaccagctg
cgtctgctcaagcgcctgatcaaatccatgaaccttgatgacaagcagtggcctgcgcgt
cagggcatgtggtacatcaacggcaaaaaagatgaaggcctgcggccaaagcacattgaa
agctatggcaatccgattgagcagacctggctgcgcatctatcaggcctatcaggaagcc
tgcgatcgcgccggtttagtcgacttcgccgagctgctgctgcgcgcccatgaactctgg
ctcaacaagccgcatatcctcaatcactaccgcgaacgctttaccaacgtgctggtggat
gagtttcaggataccaacaacattcagtacgcctggattcggatgctggcgggcgacagc
ggccgggtgatcatcgtgggcgatgatgaccagtcgatctacggctggcgcggcgcacag
gtcgagaatattcagcgcttcctgcaggatttccctggtgcagaaacgatccgtctggag
cagaactaccgctcaaccaataacatcctgaaagcggccaacgccctgatcgccaataac
aatggccgtctgggtaaagagctctggaccgaaggcagcgatggcgaaccgatctctatc
tactgcgcctttaatgagctggatgaagcgcgctttgtggtgaaccgcatcaaggtctgg
atggagaacggcggtgcgctcaacgactgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcagagcagtatgccgtaccgtatttatggcggcatg
cgcttcttcgaacgtcaggagatcaaagatgcgctctcctatctgcgtctgatggcgaac
cgcaatgacgacgccgcctttgagcgcgtagtgaataccccgacgcgcggcgtgggcgat
cgtacgctcgacgtggtgcgtcagacggcgcgtgaacgtcagatgacgctgtggcaggcc
acgcgcgaactgctgcaaagtcgcgcactggctggccgcgccgcgtctgcgctgcaacgc
ttctgtgagctggtcgattcactggccaccgaaactgccgatttaccgctgcatgttcag
accgaccgggttatcaaagactccggcctgtggctgatgtatgagcaggaaaaaggcgaa
aagggtcaggcgcgtatcgaaaaccttgaggagctggtgacggcaacgcgtcagttcagc
tatcaggatgaagatgaagatctgatgccgctgcaggccttcttatcccatgcggcgctg
gaagcgggcgaaggtcaggcagacaaatggcaggatgcggttcagctgatgacgctgcac
tcggccaaagggctggagttcagtcaggtctttatcgtcggtatggaagaggggatgttc
ccgagccagatgtcgctggatgaaggtggacggctggaagaggagcgtcgtctggcgtac
gtcggtgtgacccgcgcgatgctcaagctgacgctgacctacgctgaaacccgccgactc
tatggtaaggaagtgtatcaccggccttcccgttttatcggcgaactgcccgagacctgc
attgaagaagtgcgtttgcgcgccagcgtcagccgtccggtcaaccatcagcggatgggt
gcgccggtgaccaaaaatgacagtggattcgcgctgggccagcgtgttcatcacgcaaaa
tttggcgaaggcaccatcataaatctggaaggcagcggcgaacacagccgcctgcaggtg
gcgtttcaggggcagggaatcaagtggctggtggcggcttacgcgaagctggaaacgctt
tag
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