Pantoea vagans C9-1: Pvag_3473
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Entry
Pvag_3473 CDS
T01326
Symbol
thiC
Name
(GenBank) Thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00730
Thiamine metabolism
pva01100
Metabolic pathways
pva01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Pvag_3473 (thiC)
Enzymes [BR:
pva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Pvag_3473 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADO11596
LinkDB
All DBs
Position
complement(3682059..3683981)
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AA seq
640 aa
AA seq
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MSDPKMTRREQRAQAQEFIDSLQSGSAFPQSRRIWITGSREDIRVPMREITLSPTHIGGT
KEQPLYEQNEAVPVYDTAGAYGDPAAQIDVHRGLEKLRARWIAERDDSELLEQNSSGYTQ
QRLADEGLDHLRFDHLPTPRRARAGRRVTQLHYARQGTITPEMEFIALRENMGRERIRSE
VLLQQHPGHSFGAHLPADITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNAN
IGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQA
LEKVNGVAEALNWEIFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIM
AKWCLSHHQESFLYEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELRTLGEL
TRIAWEYDVQVMIEGPGHVPMHMIRRNMTEQLDLCDEAPFYTLGPLTTDIAPGYDHFTSG
IGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNA
MSKARFEFRWEDQFNLALDPHTARAMHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRE
FAARQDARAEPVEVGMAQMSDRFRSRGSELYHPADAIKEE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacccaaaaatgacccgtcgtgaacaacgtgcccaggcgcaggaatttatcgat
tccctgcaaagcggcagtgcttttccccagtcccgtcgcatctggattaccggcagccgg
gaagatattcgcgtgccgatgcgtgaaatcaccctaagcccgacccacatcggcggcacc
aaagaacagcctctctatgagcaaaatgaagcggtgccggtctatgacacggcgggtgct
tatggtgatcccgcggcgcagatcgatgtgcatcgtggtctggaaaagctgcgcgctcgc
tggattgctgagcgcgacgacagtgagcttctcgaacagaacagctcgggctatacccag
cagcggctggctgacgaggggctggatcatctgcgcttcgatcacctgccgacaccgcgc
cgcgcccgtgcaggccgccgtgtcacgcaactgcactatgcccgtcagggcacgattacc
ccggagatggagttcatcgccctgcgggaaaacatgggccgtgagcgaatacgcagtgag
gtactgctgcaacagcatccggggcacagctttggcgcacatctgcccgccgacattacc
cccgagtttgtccgtcaggaggtcgcagccggacgcgccatcatccctgccaatatcaat
cacccggaatcggagccgatgatcattggccgtaacttcctggttaaggtcaacgccaat
atcggtaactcggcagtcacctcttctatcgaggaagaagtggaaaaactggtctggtcg
acccgctggggtgccgatacggtgatggatctctctaccggtcgctatattcatgaaacg
cgagaatggattttgcgaaacagcccggtgcccatcggtaccgtgccgatttatcaggcg
ctggaaaaagtgaatggcgtggctgaggcgctgaactgggaaatattccgggacacgctg
ctggagcaggcggaacagggcgtcgattacttcactatccacgcgggcgtgctgctgcgt
tatgtcccgatgacggcgaaacgtctcaccgggatcgtgtcgcgggggggatcgattatg
gcgaaatggtgcctgtcgcatcatcaggagagcttcctgtatgagcacttccgggagatt
tgtgaaatctgtgccgcttacgatgtctccctgtcgctgggcgatggcctgcgtccgggt
tcgattcaggatgccaacgatgaagcccagtttgccgaactgcgtactttgggcgaactg
acgcgtattgcctgggagtatgacgttcaggtaatgattgaaggtccgggacatgtgccg
atgcatatgatccgccgtaatatgaccgaacagctcgacctgtgcgatgaagcccccttc
tacacgcttggcccgctgaccactgacatcgcgcccggctacgaccacttcacctcgggt
atcggtgccgccatgattggctggtttggttgcgccatgctgtgctacgtcacgcccaaa
gagcatctgggtctgccgaacaaagaggacgtgaagcagggattgatcacctacaaaatc
gcggcgcatgctgccgatctggcgaaaggccaccccggtgcgcagatccgtgataacgcc
atgtccaaagcgcgctttgaattccgctgggaagatcagtttaacctggcgctggatccc
catacggcaagggcgatgcatgatgaaaccctgccgcaggagtcgggcaaggtggcccat
ttctgctcaatgtgcggccccaaattctgctcaatgaaaatttcccaggaggtgcgcgag
tttgcggcacgccaggatgcccgtgccgagccggttgaagttggcatggcgcagatgtca
gatcgtttccgcagccgcggcagtgagctctatcaccctgccgatgccattaaggaggag
taa
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