Pantoea vagans C9-1: Pvag_3538
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Entry
Pvag_3538 CDS
T01326
Symbol
soxS
Name
(GenBank) Transcriptional activator of superoxide response regulon soxS
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pva03000
]
Pvag_3538 (soxS)
Transcription factors [BR:
pva03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Pvag_3538 (soxS)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_3
CBM9_1
Motif
Other DBs
NCBI-ProteinID:
ADO11657
LinkDB
All DBs
Position
complement(3756521..3756946)
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AA seq
141 aa
AA seq
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MMQEEIIHSLTDWIDQNLDKSLSIDEVAAKSGYSKWHLQRMFRSVTKQTLGGYIRERRLT
LAAEALSQTQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRHTMRRQAIQRPRLLSF
GCNDGITSFTQRTTGECCPVR
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagaagagatcattcattccctgacggactggattgaccagaacctcgataag
agcctgtcgattgatgaggttgcggcaaaatcaggctattcgaaatggcacctgcagcgt
atgttccgttccgtgacgaaacagacgctgggtggctatattcgtgagcgccgcctgacg
ctggccgcagaagcgctatcgcagacacagcgtccggtgtttgatatcgcgatgcaatat
ggctatgactcgcagcagaccttctccagggtgtttcgtcgtcagttttcacagaccccg
accgcttaccgccacaccatgcgccgccaggcgattcagcgccctcgcctgctgagtttt
ggctgtaacgacggcattaccagctttacccagcgcaccaccggcgagtgctgcccggtc
cgttaa
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