Pantoea vagans C9-1: Pvag_3683
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Entry
Pvag_3683 CDS
T01326
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pvag_3683 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pva03019
]
Pvag_3683 (pnp)
03016 Transfer RNA biogenesis [BR:
pva03016
]
Pvag_3683 (pnp)
Enzymes [BR:
pva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Pvag_3683 (pnp)
Messenger RNA biogenesis [BR:
pva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Pvag_3683 (pnp)
Transfer RNA biogenesis [BR:
pva03016
]
Prokaryotic type
tRNA degradation factors
Pvag_3683 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
ADO11799
LinkDB
All DBs
Position
3915762..3917984
Genome browser
AA seq
740 aa
AA seq
DB search
MSLVARMQLKIGNQWRATDSPAPKLRTLILLNPIVRKFQYGQHTVTLETGMMARQATAAV
MVSMDDTAVFVTVVGQKKSKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLI
SRLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVHPDIVAMIGASAALALSGLPFNGPIGA
ARVGYINDQYVLNPTADELKQSRLDLVVAGTQNAVLMVESEAEILSEEQMLGAVVFGHDQ
QQIVIENINALVAEAGKPRWDWQPEAANTPLISRVAALAEARISDAYRITDKQERYAQVG
VIKDETIAALLAEDETLDGSEIGDIVHSLEKTVVRTRILNGEPRIDGREKDMIRGLDVRT
GVLPRTHGSSLFTRGETQALVTATLGTTRDAQNLDELMGERTDSFLFHYNFPPYSVGETG
MVGSPKRREIGHGRLAKRGVLAVMPKAEDFPYTVRVVSEITESNGSSSMASVCGASLALM
DAGVPIKAAVAGIAMGLVKEDEKFVVLSDILGDEDHLGDMDFKVAGSREGITALQMDIKI
EGITREIMQEALNQAKGARLHILGVMEQAISTPRTEISEFAPRIYTIKISSDKIKDVIGK
GGSVIRALTEETGTTIEIEDDGTVKIAATDGLKAKEAIRRIEEITAEIEVGRIYSGKVTR
IVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVMEVDRQGRVRLSIKE
ATESKPQTEEAAAVTTPDAE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattagtcgcgaggatgcagctgaagattggtaatcaatggcgggctacagatagc
ccagccccgaagttaaggactttgattttgctgaatccgatcgtacgcaaattccaatat
ggtcaacataccgtcacgctggaaaccggcatgatggctcgccaggcgacagccgctgtg
atggtgagcatggacgatactgcagtgttcgtcactgtcgtaggtcagaaaaaatctaaa
ccaggtcaggacttcttcccactgaccgtgaactatcaggagcgtacttacgctgctggt
cgtatcccaggcagcttcttccgtcgtgaaggccgtccaagcgaaggcgaaaccctgatt
tcgcgtctgattgaccgcccgattcgcccgctgttcccggaaggctttgttaacgaagtt
caggttattgcgaccgtggtgtctgttaacccacaggttcatccggacatcgttgcaatg
attggtgcctctgctgcactggcgctttctggtctgccgtttaatggcccgattggtgct
gcgcgtgtcggttacatcaacgatcaatatgttctgaacccaaccgcagatgagctgaaa
cagtctcgtctggatctggtcgttgccggtacgcagaatgccgtactgatggttgaatct
gaagctgagatcctgtcagaagagcagatgctgggtgccgtggtctttggccatgaccag
cagcagatcgttatcgaaaacatcaatgctctggtggctgaagccggcaaaccacgctgg
gactggcaaccagaagcggctaacaccccgctgatttctcgtgttgctgccctggcagaa
gcgcgcatcagcgatgcttaccgcatcactgacaagcaggagcgttacgcgcaggttggc
gtcatcaaagacgaaaccattgctgcgctgctggctgaagatgaaacgctggatggttca
gaaatcggcgacatcgtgcatagcctcgaaaaaaccgtcgttcgtacccgcatcctgaat
ggcgagccacgtatcgatggccgtgaaaaagatatgatccgcggtctggacgtgcgtact
ggcgtattgccacgtactcacggttcatcactgtttacccgtggtgagacacaggcactg
gttacggcaacgctgggtactacccgtgatgcgcagaacctggatgagctgatgggcgaa
cgtaccgacagcttcctgttccattacaacttccctccatactctgtcggtgaaaccggc
atggtcggttcgccgaagcgtcgtgagattggtcacggtcgtctggcgaagcgcggtgtg
ttagcggtaatgcctaaagcggaagatttcccttacaccgtgcgtgtggtgtctgaaatc
actgaatctaatggctcctcttcaatggcctctgtctgcggtgcctcactggcgctgatg
gatgcaggtgtgccaatcaaagccgccgttgccggtatcgcaatgggtctggtaaaagaa
gatgagaagtttgtcgttctgtcagacattctgggcgacgaagatcacctgggcgacatg
gacttcaaagtagccggtagccgtgaaggtatcaccgcgctgcagatggacatcaaaatc
gaaggcatcacgcgtgaaatcatgcaggaagccctgaaccaggccaagggtgcgcgtctg
cacattctgggcgtcatggaacaggctatcagcacaccgcgtaccgagatttctgaattc
gctccacgcatttacaccatcaaaattagctctgacaagatcaaagatgtgatcggtaaa
ggcggctcagtgattcgtgcactgaccgaagagaccggcacgacgattgaaatcgaagat
gacggcaccgtgaaaatcgctgcgaccgatggtctgaaagcgaaagaagcgattcgtcgt
atcgaagagatcactgcagaaatcgaagtgggccgcatttacagtggtaaagtgacccgt
atcgttgacttcggtgccttcgttgctatcggcggcggtaaagaaggtctggttcacatt
tcacaaatcgctgacaagcgcgttgagaaagtgactgactatctgcagatgggtcaggaa
gtgccggttaaggtgatggaagtggatcgccagggccgcgtacgtctgagcatcaaagaa
gcgacagaatctaagccgcagactgaagaagctgcagcggtgaccacgcctgacgctgaa
taa
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