Pantoea vagans C9-1: Pvag_3772
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Entry
Pvag_3772 CDS
T01326
Name
(GenBank) Iron-regulated protein frpC
KO
K20276
large repetitive protein
Organism
pva
Pantoea vagans C9-1
Pathway
pva02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pvag_3772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Cadherin_5
Big_9
CshA_repeat
Big_3_5
Motif
Other DBs
NCBI-ProteinID:
ADO11887
LinkDB
All DBs
Position
complement(4018440..4024964)
Genome browser
AA seq
2174 aa
AA seq
DB search
MNVTVDTSATAPGLTDDAGNPVADGATTSDSTPTLSGGGMQPGSTVTVSDGDAEIGTATV
DADGNWTFTPDAPLADGEHALVVDGTDANGNVMNDTVNVTVDTSATVPGLTDDAGNPIVD
GATTSDSTPTLSGGGMQPGSTVTVSDGDAELGTATVDADGNWTFTPDTALADGEHALVVD
GTDASGNHVNDTINIVVQTAPSMEIVDDNGTAILDGDTISDSTPTFNGKNFEPGTTIVIA
DGDTTLTTVTVGADGNWTFTPTAGLIDGAHAIEVTVTDPQGVSASGVFNVTVDTTPPEGV
DISTVTMVDNDGATITAAGITADNTPTFSGTALEPGATVIIRDGETVLGETTVSEDGSWS
FTPSTSLDDGEHQFTFEVTDAVGNSSGVSEALDLSISATKGINTGVVVTDDAGNVIVNGE
AINDSTPTFSGQDQTPGVTVTIADGETVLGSVVVSEDGSWSFTPDTALADGNHALIVTVT
DAEGNTRTDTVNVVVDTVAPEIIDLAAVVVSDDAGNALAAGSAISDTTPTFSASGLEAGT
TVIVHDNDTVLGEAQVADDGSWSFTPSEALADGDHSFTFETVDAAGNSSGKSDAVSYVVD
SVAPEGVDITTVVITDEVGATIDTAEIQSDSKLTFSGSDLEPGTTVTMYDKGQVVGETTV
AEDGSWTFTATDGLYDGSHEVTFTVTDAAGNSSDPSGTLDLNVQAITLTASDNVSSGAAV
GFTYPVDVSEDLGTILQDGGLIAFNNKIVSDPIVVADGTIIDLDVTATSSAFINVASNST
LVLQKYDSSTSTWVTVSEENSGNLFGMFGLGASTSTITLTGLTAGQYQLVYTTSGINVGV
SFNLDASKTVYTLAEQGTPTDYTTATGNVITDVDSVYGADGIPHSAYTSVSAASVTNSDG
TVTSVTLDATTKTATLVGQYGTLVINADGSYVYTPISSMDSIGKVDSFTYTITDSATGLS
SSAQIHVQIGTTNEALDLSWDATDPSATAITDIASSNEANASVTVNYNKTSDTMPETLLT
AQNAAIYTDSFTLNSADDIVTGEFKLSTQYDFWGNNFSQDMTLVYEVQKLGEDGSWSTVT
TNELVVKAGNHSDEVLLLTDMSSLVSEAGTYRIAVSKTGATNTIRVNMNVDVLSTTDYVI
TANELATGNVLTDEGTDGAVDKLSSIYTRMYAKAGDTTSDVTVDDSYTWVTESGVTIEGE
YGTLLIYNNGAYTYTPYTTALPAGSEDVFTYALKGANGEVVNATVTIHLGVEVNGSNGGA
LVFHGTEVNDVFDVYDTSFASVDGAAGDDTLAWHGNGQLVLSDVAAKVSNIESIMLTSTT
SSDNLVLDAQSVEDVTSESNALYIKGIAGDSVTLEGTWINSGTVIVDSITYTHYTSTTAA
GTLVDIYVQQGVNLSSATYTDSQNGTEYTVTAAQDVTGTASDDIFNVSDTSFTHIDGGEG
LDTLVWSGTGTLTLSDLQSKISNIEEIELVNDSAVNNLVVTAQNVADITDADNTVFVKGA
ITDTLTLSGSWTLSGSEVVNNVDYVHYVGTTADGQTVNLYVDRDMKLSSTETASENNAAD
VTGDVALLSDSVAQSTTMNTATSSFTSESFTVNSISDLQEINVSVTGASINASNTVSVNW
SLQVYNEQTLRWDNVTTGTQAITSDSPLNVSLEGQNAGTYRIVVDSTQSGHPGFLWSTSY
DALTVKVAVNIVSTTDYKVSTSSSVNGSVFTSDSTSDSSLVVTSITAGIVTGAASYTLVA
AAGTTIAGTYGTLTIKNDGSYSYTLNSDSVIKLTGSEDSFTYVLADGSTKNLVITLGVSV
DGSEGGALIFAGTVGDDSFTVHDTQFTSVDGKSGQDTLVWNGTGELNVSEIADKVNNIEI
IDLQDNAQATALLIGADDIEKITDASNVLYVRGGSNDSLSLQGVWAVNGVETLNNITYTL
YTSTALDGTAIKLYVQQGLQFNEVTEHLVGSIQDVSADLTVVSVSQNGETTAITDDAVSV
KGAYGTLVIDEAGHYSYVVDDAYAHSGNTDTFTYALSDGSNASLSFDLGVDVDGSAGGEI
TFTGTRGGDVFEVYDTDFTSINGAEGNDTLAWHGTGTLNLSDISARVNNIETIDLMTDAG
KDNLVVSAESLLKVTDNDNTLYVRGENGDTVTLNGNWEQADGIVANGVNYNHYTSSAADG
SVVQLYIEDDITIG
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtgaccgtcgacaccagcgccaccgcgccgggcctgaccgacgacgccggtaat
ccggtcgctgacggtgcgaccaccagcgacagcaccccgaccctcagcggcggcggcatg
cagccgggttccaccgtgaccgtctcggacggcgacgctgaaatcggcaccgctaccgtc
gatgcggacggcaactggaccttcacgccggacgcaccgctggccgacggcgagcacgcc
ctggtcgttgacggtaccgacgctaacggtaatgtcatgaacgacaccgtgaacgtgacc
gtcgacaccagcgccaccgtaccgggcctgaccgacgacgccggcaatccgatagtcgac
ggcgcaaccaccagcgacagcacgccgaccctcagcggcggcggcatgcagccgggatcc
accgtgaccgtctctgacggcgacgccgaactcggcaccgctaccgtcgacgcggacggc
aactggacctttacaccggataccgcgctggccgacggcgagcacgccctggttgtcgac
ggtacagatgccagcggtaatcatgtcaatgacaccattaatatcgtggtgcaaaccgcg
ccgtctatggagatcgttgatgataacggtaccgctattctggatggcgacaccatcagt
gacagtacgccaacgttcaatggtaaaaactttgaacctggaaccacgattgtcatcgca
gacggcgataccacgctgactactgtgactgtaggcgcagatggcaactggaccttcaca
ccaaccgctggattgattgacggtgcgcatgccatcgaggtcaccgttaccgatccacag
ggcgtcagtgccagcggcgtcttcaacgtcactgtcgataccacaccgccggaaggggtt
gatatctctacggtcacgatggtcgataacgacggtgccaccatcaccgcagccggtatc
acagcagataatacgccaaccttcagtggtacagcgctggagccgggcgcgaccgtgatt
attcgcgatggtgaaaccgtattgggtgaaaccacggtcagcgaagatggcagctggtcc
tttacaccttcaacctcgcttgacgatggtgaacatcagttcacattcgaagtcaccgat
gcagtcggtaacagcagtggcgtatctgaagcgctggacctgtcaatctccgcaactaaa
ggtatcaacaccggtgttgtggtgaccgatgatgccggcaatgtaattgtgaatggtgaa
gccattaacgacagcacaccgacctttagcggccaggatcagacgccaggcgtaacagtc
accatcgccgatggtgaaaccgtgctgggcagtgtcgtggtttctgaggacggaagctgg
agctttacgcctgatacagcgctggctgacggtaaccatgcattaatcgtgaccgtaaca
gatgcggaaggaaacacccgtacagacactgttaacgtcgtggtcgacaccgttgcgcca
gagatcattgatctggccgcagtggtcgtctctgatgatgctggtaatgcgttagctgct
ggcagcgcgatcagtgacaccacgccgaccttcagtgcctcaggactggaagcaggcacc
accgttatcgttcacgataacgatacggtattgggtgaagcgcaggttgcagatgacggc
agctggtcattcacgccatctgaagcgctggctgatggtgatcacagctttacgtttgaa
acagtcgatgcggcaggtaacagcagcggtaaatcagacgctgtcagctatgtcgtggac
tctgttgcacctgaaggcgtggacattactacggtagtgatcacggatgaagtgggtgca
actatcgatacagccgaaatccagagcgacagcaaactcaccttcagcggcagcgatctt
gagcctggtaccactgtcacaatgtacgacaaaggccaggttgtcggtgaaaccaccgtc
gccgaagatggcagctggactttcaccgccactgacggattgtatgatggcagccatgaa
gtgacctttactgtcacagacgcggcaggcaacagcagcgatccatccggcacgctggat
ctgaatgtgcaggccattacgctgacggcctccgacaatgtcagctcaggtgccgcggta
ggctttacctatccggttgatgtcagtgaggatctgggaaccatcctgcaggacggcggg
ttaatcgcgttcaacaataagatcgtcagtgatccgattgtggtcgcagacggcaccatt
atcgatcttgatgtaaccgcgacttcttctgccttcattaacgtcgccagtaactcgaca
ctggtgttgcagaagtatgactcgtcaaccagcacctgggtcaccgtgtctgaagagaac
agcggaaacctgtttggcatgtttggactgggtgcatcgacgtccaccatcacgttaacc
gggctgactgccggccagtatcagctggtttacaccaccagcggtattaacgtcggcgta
agctttaatctggacgcctctaaaaccgtctatacgctggcggaacagggcacaccgacc
gactacaccaccgcaaccggcaatgtgataacagacgtcgacagcgtttatggtgcagat
ggtattccgcacagtgcctacacctctgtgagcgcggcgagcgtgaccaacagtgatggc
accgtgacctctgtcacgctggatgctaccaccaaaaccgccacgctggtcggtcagtat
ggcacgctggtcatcaacgctgatggcagctatgtctataccccgatctcatccatggac
agcatcggtaaggtggattcatttacctataccattactgactctgcgacgggactgagc
tcatcagcccagattcacgtacagattggtacaacaaacgaagcgctggatctgagctgg
gatgctaccgatccttccgcaaccgccattacggatatcgcttccagcaacgaggcgaat
gccagcgttacggtgaactacaacaaaaccagtgacacgatgcccgaaactctgctgaca
gcacagaatgcagccatttacaccgactcattcacgctgaattctgcagatgacattgtg
accggcgagtttaagctctcaacgcaatatgatttctggggcaataacttctcgcaggat
atgactctcgtctatgaagtccagaaactgggagaggacggaagctggtcaacggtaacc
accaacgagttagtagtgaaagcgggcaatcatagtgacgaagtgctacttctcaccgac
atgtcctctctggtttctgaagcaggtacctatcggattgctgtctccaaaacgggggcc
accaatacgatcagagtgaacatgaacgtggatgttttaagtactacggactacgtcatc
accgcgaatgaactcgccactggcaacgttctgaccgacgaaggcacagacggtgcggtt
gataagctcagctctatctatacacggatgtatgccaaagccggtgacactaccagcgat
gtaacggtcgatgacagctatacctgggtcaccgaaagtggcgtgacgatagagggagag
tacggcaccctgcttatctataacaatggcgcatatacctacacgccatacaccaccgcc
ctgccagccggctctgaagacgtcttcacctatgcgctgaaaggggccaatggtgaagtg
gttaatgccaccgttacgatccatctgggtgttgaagtcaacggcagcaatggcggtgcg
ctggtgttccacggcactgaagtcaacgatgtgtttgatgtgtatgacaccagcttcgcc
tcggtagatggcgcggctggcgacgatacgctggcatggcatggcaatggccagctggtc
ttgagcgacgtcgcggcgaaagtcagtaatatcgaatcgatcatgctgacctcaaccacc
agcagtgacaacctggtactggatgcgcagagcgtggaagatgtcaccagcgaaagtaat
gctctctatatcaagggcatcgctggcgacagcgtgacgctggaaggcacctggatcaac
agtggtacggtgattgtcgacagcatcacttacacgcactacaccagcaccactgctgcc
ggtaccctggtcgatatctacgtgcagcagggggttaatctttcttcagccacctatacg
gatagccagaatgggacggaatataccgttaccgctgcgcaggatgtaaccggtacggca
agcgacgatatctttaacgtgagcgataccagctttacccacattgatggcggtgaaggt
ctggatacgctggtgtggagcggtacgggcacattaacgctcagcgatctgcagtcgaaa
atcagtaatatcgaagagatcgagctggtgaatgacagtgcagtgaataatctggtggtc
accgcgcaaaacgtggcggacatcaccgatgctgataacacggtgtttgttaaaggtgct
atcaccgacacactgacactctctggtagctggacgctgtcaggcagtgaagtggtcaac
aatgtggattatgtccattacgtgggtaccaccgctgatggtcagacagtgaatctctac
gttgatcgcgacatgaaactgagtagcaccgaaaccgcgtctgaaaacaatgcggccgac
gtaacgggcgatgttgcccttctcagcgacagtgtggcacagagcaccacgatgaacacc
gcaaccagcagctttaccagtgagagcttcacggttaacagcatcagcgatctgcaggag
ataaacgtcagcgtgaccggggcgtcgatcaatgccagcaatactgtttcggtgaactgg
tcgttgcaggtttacaacgagcagacgctgcgctgggacaacgtgaccaccggcacacag
gcgatcaccagcgatagtccgctgaatgtttcgctggagggtcagaatgcgggaacctac
cgcatcgtggtcgacagcacgcagtccggacatcctggcttcctctggtctaccagctat
gacgcgctcaccgtgaaagtggcagtgaacatcgtcagcaccaccgactataaagtcagc
accagttccagcgtcaatggttcggtctttaccagcgacagcaccagtgacagttcgctg
gtagtgacgtcgataacggcgggtattgtgaccggtgccgcaagctatacgttggttgcc
gctgcgggaaccactatcgcgggtacttacggcacgctgacgattaagaacgatggcagc
tatagctacacactgaatagcgactcggtgatcaaactgaccggcagtgaagattcattc
acctatgttctggcggatggaagcaccaaaaatctggtaatcacgctgggtgtttccgtg
gatggctctgaaggtggcgcgctgatctttgccggtaccgttggcgatgacagcttcacc
gttcacgacacccagttcacctcggtggacgggaagtcgggtcaggatacgctggtctgg
aatggcacaggcgagctgaatgtcagtgagattgcggacaaagtgaacaatatcgaaatc
atcgatctgcaggataacgcccaggcaacggcgctgctgattggtgccgatgatattgag
aaaatcacggatgccagcaatgtgctgtatgtcaggggtggcagcaatgactccctttca
ctgcagggcgtgtgggctgttaatggcgtggaaacgctgaataacatcacctacaccctc
tacaccagcacggcgctggatggcacggcaatcaaactttatgttcagcagggtctgcaa
ttcaacgaagtgacagagcatcttgtcggttccatccaggatgtctccgccgatctgacc
gtggtatcggtgagccagaacggtgaaaccaccgccatcactgacgatgcggtgagcgtc
aaaggtgcctacggcacgctggttatcgatgaagcgggtcactacagctacgtggtggat
gatgcgtatgcgcacagcggcaacactgacaccttcacctatgccctgtcagacggcagc
aatgcttctctgagctttgacctgggcgttgatgttgatggcagtgcgggcggcgagatc
accttcaccggtacccgcggtggagatgttttcgaagtctatgacaccgatttcacctct
atcaacggtgcagagggtaacgatacgctggcctggcatggcacaggaacgctgaacctc
agtgatatctcggccagggtcaacaatatcgaaaccatcgacctgatgacggatgccgga
aaagacaatctggtcgtaagtgcagaaagtctgctgaaggtcactgataacgataatacg
ttatatgtcagaggggaaaatggcgacacggtgacgctgaatggtaactgggagcaggca
gacggaatagtggcaaatggggttaactataaccattacaccagttctgcagccgatggc
tccgtggtacagttatatattgaagacgatatcaccatcggataa
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