Pantoea vagans C9-1: Pvag_pPag10030
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Entry
Pvag_pPag10030 CDS
T01326
Symbol
hns1
Name
(GenBank) DNA-binding protein
KO
K03746
DNA-binding protein H-NS
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pva03036
]
Pvag_pPag10030 (hns1)
03400 DNA repair and recombination proteins [BR:
pva03400
]
Pvag_pPag10030 (hns1)
Chromosome and associated proteins [BR:
pva03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Pvag_pPag10030 (hns1)
DNA repair and recombination proteins [BR:
pva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pvag_pPag10030 (hns1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF7610
Spc24
DUF4110
DUF3886
Motif
Other DBs
NCBI-ProteinID:
ADO07858
LinkDB
All DBs
Position
pPag1:complement(31689..32090)
Genome browser
AA seq
133 aa
AA seq
DB search
MTKNLSSLNNIRTLRAEARNMALDMLEELRQKLETVVNERRDEENARAAEAREKAEKLAF
YHELLMEEGINPAELVNSDAIAVSGKKKRAKRPAKYRYTDENGQVREWTGQGRTPSVIKA
AIENGQSLDDFLL
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaacctgagcagcctgaataatatccgcacgcttcgtgcagaggcgcgcaat
atggctctggatatgctcgaagagttgcgccagaaattagagaccgtggtaaatgagcgt
cgtgatgaggaaaacgcacgagcggcagaagcccgtgaaaaagcggagaaactggctttt
tatcatgagctgttaatggaggaagggatcaatccggcggaactggtgaatagcgatgct
attgcggtatccgggaaaaagaaacgcgcgaaacgtccggcgaaatatcgttacaccgat
gaaaatggtcaggtacgcgaatggacgggtcagggccgtactccctccgtcattaaggcg
gcgattgaaaatggccagtcgctggatgatttcctgctttag
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