Pantoea vagans C9-1: Pvag_pPag10127
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Entry
Pvag_pPag10127 CDS
T01326
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
pva
Pantoea vagans C9-1
Pathway
pva03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pvag_pPag10127 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pva03400
]
Pvag_pPag10127 (uvrA)
DNA repair and recombination proteins [BR:
pva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pvag_pPag10127 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pvag_pPag10127 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
RsgA_GTPase
AAA_16
DnaJ_CXXCXGXG
nSTAND1
DUF4350
AAA_22
AAA_33
AAA_18
nSTAND3
NACHT
Viral_helicase1
cobW
MobB
Motif
Other DBs
NCBI-ProteinID:
ADO07955
LinkDB
All DBs
Position
pPag1:complement(133106..135643)
Genome browser
AA seq
845 aa
AA seq
DB search
MTEQDNAQTYRADEHIDPYVSVQGARTHNLKDVSLRFPRNAMVVFTGVSGSGKSSLAFDT
LYAEAQRRFIESVSPHARRLIDQAAAPDVDNIDGLPPAVALQQSRAGAQERSTVGSLTRI
SVTLRLLFSRAGTRPDGVPFMTADYFSPNNPEGACPHCQGLGRVHTVRTEAMVPDRSLSI
RQGAIASWPRGWHNKNLRSILETLSYDVDAPWDTLSARDQQWILLTDEQPSVPIFMGLNA
EQREKALAAGEEPAYTGTYTSAAKIVLQSYSGGSETTKKRLARFVTVTPCSVCHGKRLNR
NALSVTFAGYDIASLSELSVSELAERLRPYADGSSSDLPAEAALREAVIRMASDICMRLE
QLETLGLGHLAPARRTTLLSSGELQRVRLATQLISRLFGVLYVLDEPSAGLHPEDVKALL
ASLRNLVRAGNSLVVVEHNIDLIAEADWLIEVGPGPGTHGGEIVYNGEPAGLKDVSASPT
SGYLFSRSYTGLRQRQPAESWLRLEQVHCNNITGVDIAIPLARMTAVTGVSGSGKSTLLN
RVLPEMLGRFDKTSDSEEGEEEDLVPDVKGQVVSGNDAIGRLVRIDQRPIGRTPRSNLAT
YTGFFDIVRRLFAETPEAKARGFSASRFSFNLPAGRCPACEGQGQISIELLFMPSATATC
SVCAGSRYNPETLEVKWNDLTIADVLDLTVDDATRVFDGYDGIQRSLSALRSLGLGYLTL
GQPATELSGGECQRIKLAWELQRVQRTATLYLLDEPSTGLHPSDMDKLLIVLNELVTRGH
TVVMAEHTMRIVAEADWVIDLGPGSGLKGGRIVSSGTPEAVSTSAESLTAPWLSAQLKKR
AGDPA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaagataacgcccaaacttatcgcgctgatgagcacatcgatccttatgtc
tcggtgcagggtgcaagaacacataatctcaaagatgtatcgctgcggtttccccgtaat
gccatggtggtgttcaccggggtttcagggtccgggaaatcctcactcgcctttgatacg
ctttatgcagaagcccagcgccggtttattgagtcggtttcaccccatgcccgtcgcctg
atcgatcaggccgctgcgccggatgtggataacattgacggactgccgcctgcggtggcg
cttcagcagagccgggctggcgcgcaggagcgttcaacggtaggcagcctgacccgaatt
tccgtcacgctgcggctgctgttttcccgtgcgggcacaaggcctgacggtgtgccgttt
atgaccgccgattatttctcgcctaacaatcctgaaggtgcctgtccgcattgccagggg
ctgggacgggtccataccgtcagaaccgaggcgatggtgccggacaggtcactgagcatc
cggcagggcgccatagcttcatggccgcggggctggcataacaaaaatctgcgcagcatc
cttgagacgctcagctacgatgtcgatgccccctgggatacgctttcagcccgcgaccag
cagtggatactgctgactgacgagcagccatcagtgccgatttttatgggtctgaacgct
gaacagcgtgaaaaagccctagcggctggcgaagagcccgcttataccggcacctacacc
agcgcagcaaaaatcgtattgcagagctattccggtggcagcgagacgacgaaaaaacgg
ctggcgcgctttgtcacggtcacgccctgttcagtgtgtcatggcaaaaggttaaaccgg
aacgcactgtccgtgacctttgccggttatgacattgccagtctgagtgagctgtcggtt
tctgaacttgctgaacggctgaggccttatgcagacggttcatcatcagatctgcctgcc
gaggcggcgctgcgggaagccgtcatccggatggcgtcagatatctgcatgcggcttgaa
cagcttgagacgctgggacttgggcatctggcaccggcacgccgcaccacgctgctctcc
tccggcgagttgcagcgcgtacgtctggctacccagctgatatcgcggctgtttggcgtg
ctttacgtgctggatgagccttcagctggtctgcatcctgaggatgtcaaagcgctgctc
gcatccctcaggaatcttgtgcgtgcaggtaattcgctggtggtcgtcgagcataatatt
gatctcatcgccgaggcggactggctcatcgaagtcggtcccggcccgggaacacatggc
ggagagattgtttataacggtgaaccggcaggtcttaaagacgtcagtgcctcaccgacc
tcaggctatctcttctcccgcagctataccgggctgcgccagcgccagcccgcggaaagc
tggctcaggcttgagcaggtccattgcaacaatattaccggcgtggatatcgccatcccg
ctggcgagaatgacggcggttaccggtgtttccggctccggcaaatcgacgctgctgaat
cgcgtacttccggaaatgctcggacgttttgacaaaacatctgacagtgaagagggtgag
gaagaggacctggtgccggacgttaagggtcaggttgtcagcggaaatgacgccattggc
cgtctggtcagaatcgatcagcgtcctatcgggcggacgccacgctccaatctggccacc
tataccggctttttcgatatcgtccgccggctgtttgcagagacacccgaggccaaagcc
cgaggtttcagcgccagccggttttccttcaatctgcctgcgggtcgctgtcctgcgtgc
gagggacagggccagatttcgattgagctgctctttatgcccagcgccaccgcaacctgc
tcggtctgtgcgggaagccgttacaaccccgaaacgctggaagtgaagtggaacgacctg
accatagcggatgtgcttgatcttaccgtagatgatgccaccagggtgtttgacgggtac
gacgggatccagcgttcactgtcggcactgcgatctctggggctgggatacctgacgctg
ggtcagcccgccacggagctctctggcggtgagtgtcagcgcatcaagctcgcctgggag
ctgcaacgcgtccagcgcacagccacgctctatctgcttgatgaaccgtcaaccgggttg
cacccatccgacatggacaaactgctgattgtgctgaatgaactggtgacgcgcggccac
accgtcgtgatggcggaacacacaatgcgcattgtggcagaggcggactgggtgattgat
ctggggcccggttcggggctgaagggcggaaggattgtctcgtccggtacgccggaagcg
gtcagcacatccgcagagagtctgactgcgccatggctttccgcacagcttaaaaagagg
gcgggcgatccggcgtaa
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