Pantoea vagans C9-1: Pvag_pPag30316
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Entry
Pvag_pPag30316 CDS
T01326
Name
(GenBank) HTH-type transcriptional regulator
KO
K03406
methyl-accepting chemotaxis protein
Organism
pva
Pantoea vagans C9-1
Pathway
pva02020
Two-component system
pva02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pvag_pPag30316
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Pvag_pPag30316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pva02035
]
Pvag_pPag30316
Bacterial motility proteins [BR:
pva02035
]
Flagellar system
Chemotaxis proteins
MCPs
Pvag_pPag30316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
MCP-like_PDC_1
McpB_HAMP_1st
Motif
Other DBs
NCBI-ProteinID:
ADI78385
LinkDB
All DBs
Position
pPag3:complement(314662..316602)
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AA seq
646 aa
AA seq
DB search
MASQLTHKKRMSTRAQMLIMGGLTIMLGFTVTIGVLSWQSGKEQKVLAENYLQQIAQSRA
LQVQQELGHARDVASHLGQSLIALPQAGITDRKVADKVMEYALRANPDYLSMSVIFEQNA
FDGRDAGFASQPGQAPQGRYAFFVDRDASGKYAMHPLLSYLTPGQGDYYLIPQKSQKDTL
TEPYSYAYNGVPTLLTSVAAAIIDQGTLKAIVTSDISLASLQQKVNQIKPWQGSGYALLL
SNGGNVVSSPVKEEAGKPWKGEKDGFTTKVVQHFDAVLGEEALVTWQPVVIGNSDKPWYL
GVVAPVSQVMAAANRQLMWALLLMVVSILLVGTVLGMLFSRKVLRPIGGEPIKAANIALA
VADGKLDNAIAVKNGDRSSLFFALHTMQSQLRQIVGQIKDSSESVRQGAGEIASGNLNLA
SRTEEQAAALEQTAASMEQISATIRLNADNAQQATSLTENATHIASRGASLVGEVVQTMA
QIDDSSKKIGDITTMINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAN
AVKEIGALIEESSVRVESGVRLVNDAGKTMQEMMQAVNSVQGIIGEIVTASSEQARGISQ
VTIAVNEMDGVTQQNAALVQQMSAAASSLEDQAQQLSQTVEQFHLA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcagttaacacataagaaaagaatgagtacccgtgcgcagatgctgatcatg
ggtggtttgacaatcatgctgggatttaccgtgactatcggcgtcctcagctggcaatcg
ggtaaagaacaaaaggtactcgcagaaaactatctgcagcagatagcacagagccgtgcg
cttcaggtgcagcaggagctgggtcatgcccgtgatgttgccagtcatctcgggcaaagt
ctgattgcgctgccgcaggcgggtatcaccgatcgcaaagttgccgataaagtcatggag
tatgcgctgcgcgctaatcctgattatctgtcgatgtcggtgatattcgaacagaatgca
tttgatggtcgcgatgccgggttcgcatcacagccgggccaggcgccacagggacgctat
gccttttttgtggatcgtgacgcgtcaggtaaatacgcgatgcatccgctgctctcctat
ctgacgccgggtcagggcgattactatctgatcccgcaaaaatcacaaaaagatacgctt
accgaaccttacagctatgcctataacggcgtgccgacacttctgacttctgtggctgcc
gcgattatcgatcagggcaccttaaaagcgatcgtcacctctgacatttcactggcctca
ctgcagcagaaagtgaatcagatcaaaccctggcagggcagcggctatgcgctgttgctc
tcaaatggcgggaatgtggtgtcctcgccagtgaaagaggaagccggtaaaccctggaaa
ggcgaaaaagatggctttacgacgaaagtcgtacagcattttgatgccgtgctgggcgaa
gaggcattagtcacctggcagccggtggtaattggtaacagtgacaaaccctggtatctc
ggcgtcgtcgcaccggtcagtcaggtgatggctgctgccaaccggcaactgatgtgggca
ctgctgttgatggtggtgagtattctgctggtcggcactgtactgggcatgctgttcagt
cgtaaggtgctgcggccgattggcggcgagccgattaaagcggcaaatattgcgctggcc
gtcgcggatggcaagctggataacgcgatcgcagtgaaaaacggcgaccgcagcagcctc
ttctttgcgcttcatactatgcaaagccagctccggcagattgtcgggcagataaaagat
tccagtgaatcagtacgacagggcgcgggcgaaattgccagcggcaacctcaatctggcg
tcacgcactgaagaacaggccgccgcgctggagcagactgcagccagcatggagcagatc
agcgccacgatccgcctgaatgccgacaatgcgcagcaggcgaccagcctgactgaaaac
gcgacgcacattgccagtcgcggtgcctcgctggtgggcgaagtggtgcagaccatggcg
caaatcgatgacagctcgaaaaagattggcgacattaccaccatgatcaatagcattgcc
tttcagaccaatattctggcgctcaacgcggcggtagaagcagcacgcgccggtgagcag
ggccgcggttttgcggtggtcgcgtcggaagtgcgaaatctggcgcagcgcagtgctaat
gcggtcaaagagatcggcgcactgattgaagagtcgagcgtacgtgttgagagcggcgtc
cggctggtaaacgatgcaggtaagaccatgcaggagatgatgcaggcggtgaattcggtg
caggggattatcggtgagatcgttacagcgtcaagcgaacaggcgcgcggcatcagccag
gtaacgattgcggtcaatgaaatggatggcgtcacccagcagaatgctgcgctggtgcag
cagatgtcggcggccgccagttcgctggaagaccaggcgcagcagctgtcgcagacggtg
gagcagtttcatctggcgtaa
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