Pantoea vagans C9-1: Pvag_pPag30339
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Entry
Pvag_pPag30339 CDS
T01326
Symbol
dfoJ
Name
(GenBank) putative pyridoxal-dependent decarboxylase
KO
K28682
lysine decarboxylase [EC:
4.1.1.18
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00975
Biosynthesis of various siderophores
pva01100
Metabolic pathways
pva01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00975 Biosynthesis of various siderophores
Pvag_pPag30339 (dfoJ)
Enzymes [BR:
pva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
Pvag_pPag30339 (dfoJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
SepSecS
PDXDC1-like_cen2
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADI78408
LinkDB
All DBs
Position
pPag3:338774..340336
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AA seq
520 aa
AA seq
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MLLRSSTQTALDLAPASNASGAETAIFNDQQLAAWSQQTQEVLALMTRTVTGVEKPFSGI
LPHELAAEFSDVDLDRPLGNNDDALAELSQLYLHDAVWFHHPKYLAHLNCPVVLPSLMAE
QIMAAVNSSVDTWDQSAGGTLIEQKVIDWTLGRIGLPAGSDGIFTSGGTQSNLMAMLLAR
DSWCAEHHPGHLIKHRGLPETASKWRVFTSKLSHFSIQKSMAILGLGYDAVIAVDHDDHY
RMDAKCLEEEIVRCRSEGLIPIAVVATSGTTDFGSIDPLPDIARLCEDYGLWMHVDAAYG
CGLLVSENHRARLNGIERADSVTVDYHKSFFQTVSCGAFFVRDSHDLKHVTHHADYLNPL
SAQQEGTPNLVNKSIQTTRRFDALKMWLTLRVMGPAALGDAFDTLIDLTQAAHQLLTAHP
AIEVLHAPELTTQIFRYVPGKHASDAQIDEINAAIRKALFRSGNAVIAGTKVDGRQYLKF
TLLNPTTTTADIEDVLSLIAHYGREQVRASALSAANHGEI
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcttttacgctcatccactcagacggcactggacctcgcgccagcctccaatgccagc
ggagccgaaacggctatttttaacgatcagcaactggcggcctggtcgcagcagactcag
gaggtgctggcgctgatgacgcgcaccgtgactggcgtagagaagcctttcagcgggatt
ctgccccacgaactggcggcggagttcagcgatgtcgatctcgatcgtccgctgggcaat
aacgatgacgcgctggcagagttgagtcagctctatctgcatgacgccgtctggttccac
catcctaaataccttgcgcacctgaactgcccggtcgtgctgccctctctgatggccgaa
cagattatggcggcggtaaacagctcggttgatacctgggatcagagtgccggcggcacg
ctgattgagcagaaggtgatcgactggacgctgggccgtattggtctgcctgccggatcg
gatgggatctttaccagcggcggcactcaatccaacctgatggcaatgctgctggcgcgt
gacagctggtgcgcggaacatcatccggggcatctgattaagcatcgcggcctgccggag
acggcgtcgaagtggcgggtgtttacctcgaaactcagccacttcagtattcagaagtcg
atggcgattctgggtctgggctatgacgcggttatcgccgttgatcacgatgaccactac
cgcatggatgcaaaatgcctggaagaggagatcgtacgctgccgcagtgaagggctgatc
ccgattgctgtggtcgccaccagcggcaccaccgactttggcagcatcgatccgctgccc
gacatcgcccgtctctgtgaagattatggtctctggatgcacgttgatgccgcttacggc
tgcggtctgctggtttctgagaatcatcgcgcacggctgaacggcattgagcgtgctgac
tccgtcactgtcgattatcacaaatcgttcttccagaccgtcagctgcggcgccttcttt
gtgcgcgacagccatgacctgaagcatgtcacgcaccatgcagattacctgaatccactc
agcgcgcagcaggaaggcacgcccaatctggttaacaaaagtattcagaccacacgccgt
tttgacgccctgaaaatgtggctgacactgcgcgtgatgggcccggcggcgctgggtgac
gccttcgatacgctgatagatctgacccaggccgcgcaccagctgttaactgcgcatcct
gccattgaagtgctgcatgcgcctgagctgacgacccagattttccgttacgttcccggc
aaacatgccagcgacgcgcagatcgacgagatcaacgctgccatccgtaaagcgctgttc
cgttccggtaatgcggtgattgcgggcaccaaagtcgacggtcgtcagtacctgaaattt
accctgttaaatcccaccacgaccacggccgacattgaagatgtactgagcctgattgcg
cactatggccgcgaacaggtgcgtgcctctgcgctgagtgcggcgaatcatggagagatc
tga
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