Polaromonas vacuolata: HC248_00052
Help
Entry
HC248_00052 CDS
T06542
Symbol
cdhR
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvac03000
]
HC248_00052 (cdhR)
Transcription factors [BR:
pvac03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HC248_00052 (cdhR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
QJC54790
UniProt:
A0A6H2H4L9
LinkDB
All DBs
Position
complement(53708..54706)
Genome browser
AA seq
332 aa
AA seq
DB search
MSDTFSTPQISTVQAHDADEHAHNLTDWEQSYDQVTRGAFHGVLTELKMPQMQIFREHTS
QALRQSCCVWPQAFWFGIPNLASTQSLPVTDKVRINGRQGHSDAIMVRPGNCEFELLTPT
HYTVYGIVVKTDSLQAAADRMHCVIDWQKLAKTEVLHVSDASRHACLQLLGQLSSSENKP
LDSHTSQTVAGANADEESVILTVLSMLDSGEVDCAVSNSFMRRRRIVAQARDYVLERKDR
LTSVVELCECLHVSRRTLQYCFEDVLGMSPIQYLRIIRLNGARRELREPVSKVRKVSDVA
ADWGFGHLSQFANDYRKLFGQTPSECLHQHPH
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaccttcagcacgccccaaatttcaaccgtgcaggcacatgatgccgatgag
catgcccacaatctgacggactgggagcaaagttatgaccaagtcacgcggggcgctttt
cacggcgtactgaccgaattgaaaatgccgcagatgcagatttttcgcgaacacactagt
caagccctgcgccaatcctgttgtgtttggccgcaggcattttggtttggcataccgaac
cttgccagcacgcaaagtttgccggtgacggataaagtccgcatcaatggccgtcaaggt
catagcgacgccatcatggtgcgccctggaaactgcgaatttgaactgctaacgcccact
cattacacggtctacggaatagtcgtcaaaaccgacagcttgcaggctgcggctgatcga
atgcactgtgtcattgactggcaaaagctggccaagaccgaagtactacatgtctctgac
gctagccgccatgcctgtttgcagctattgggacagctaagctcatcagaaaacaaacct
ctagatagccataccagtcagaccgtagccggtgcaaacgctgacgaggaaagcgtcata
ttgaccgttctgtcgatgttagatagcggggaagtagactgtgcagttagcaacagcttt
atgcggcgcaggcgcatagtggctcaagcacgcgactatgtgctggaacgcaaagaccgg
ctgaccagcgttgtcgaattatgcgagtgcctgcatgtcagccgccgaaccctgcaatac
tgttttgaggatgtgctgggcatgagcccgattcagtacctgcgcatcattcggctcaac
ggtgcgcgccgagaattgcgcgagcctgtcagcaaagtccgcaaggtgagcgatgttgcc
gctgactggggcttcgggcacttaagccagtttgccaacgattaccgcaaactgtttggt
caaacaccgtctgagtgtttgcaccaacacccgcattga
DBGET
integrated database retrieval system
