Polaromonas vacuolata: HC248_00099
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Entry
HC248_00099 CDS
T06542
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvac03400
]
HC248_00099 (radA)
DNA repair and recombination proteins [BR:
pvac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HC248_00099 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
RecA
ChlI
AAA_16
Lon_C
AAA_22
DnaB_C
GvpD_P-loop
DUF7125
zinc_ribbon_6
nSTAND3
NPHP3_N
NTPase_1
AAA_24
Rad51
SLFN-g3_helicase
AAA_30
MCM
AAA_14
AAA_29
AAA_19
NACHT
HypA
DAP3
Motif
Other DBs
NCBI-ProteinID:
QJC54837
UniProt:
A0A6H2H4Z3
LinkDB
All DBs
Position
104032..105420
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AA seq
462 aa
AA seq
DB search
MAKEKTVFTCNDCGGTSPKWLGKCPHCNAWNTLLESIAENPSAAKNRYSGQYQGLTKASA
VITLSDIDASDMQRIPTGHEELDRVLGGGIVEGGVVLIGGDPGIGKSTLLLQAMDSMQRS
GHRTLYVTGEESGAQIALRSRRLGLDGSQVMVLAEIGLEKILATLEATQPMIAVIDSIQT
VYSDHLSAAPGSVSQVRECAALLTRAAKASGVCIVLVGHVTKEGALAGPRVLEHMVDTVL
YFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTEKGLKGVANPSAIFLSQHSEPVPGSCVM
VTLEGTRPLLVEIQALVDNGGPSPRRLSVGLDKDRLAMLLAVLHRHAGVACMDQDVFVNA
VGGVRISEPAADLAVMLAITSSLRGRALPKGFIAFGEVGLAGEVRPAPRGQERLKEAAKL
GFTVAIVPKANAPKKDSKDFEGLTIHPVERIEQALEVVRSLA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaaaaaccgtcttcacctgcaacgattgcggcggcaccagccccaagtgg
ctgggtaaatgtccgcattgcaatgcatggaacaccctgctggaatctatcgccgagaat
ccttcggcagcgaaaaaccgctacagcggccagtaccaaggactgaccaaggcctcagcc
gtcatcaccttgtccgatatcgacgccagcgatatgcagcgtatccccaccggtcacgaa
gaactcgacagagtgctgggtggcggtattgtcgaaggtggcgtggtgctaattggcggt
gaccccggcattggtaagtccacgctgctgcttcaagcgatggactctatgcagcgcagc
ggccaccgcacgctatacgtcacgggcgaagaaagcggtgcgcaaatcgcgctgcgctct
cggcgtctgggcttagacggctcgcaagttatggtgctggctgaaattggcttagagaaa
atcctcgccacgcttgaagccactcagcccatgattgcggtgattgactctatccaaacc
gtctattccgaccacttgtcggcggctccgggttcggtctcacaggtgcgcgaatgcgct
gccttgctgactcgcgcagctaaggccagcggcgtgtgcattgtgctggttggccatgtc
accaaagaaggcgcgttggccggcccgcgtgtgctggagcacatggtcgataccgtactg
tattttgaaggcgatacgcattcgagctttcgcttagtgcgggcgattaaaaaccgcttt
ggcgcggtcaatgaaatcggggtttttgccatgaccgaaaaaggtctgaaaggcgtggcc
aacccgagcgcgatttttctcagccagcacagcgaaccggtacccggcagctgcgtcatg
gtcacgcttgagggcacgcggccgctgctggtggagattcaagcactcgtcgacaacggc
gggcctagcccgcgccgactgtctgtgggtctggacaaagaccggctggccatgctgttg
gcggtgctgcaccgccatgctggcgtggcgtgtatggatcaagatgtgtttgtcaacgcg
gtggggggcgtgcgtattagcgagccggcggctgatttggcggtgatgttggcgataacc
tccagtctgcgaggccgggccttgcccaagggttttatcgcctttggcgaggtcggtctg
gccggcgaggtaaggccagcgccgcgcggccaagagcggctcaaagaagcggccaagctg
ggctttaccgtggccatagtgcccaaagcgaatgcgcctaaaaaggacagcaaggatttc
gaaggtttgacgattcacccggtcgagcgcattgagcaagcgctagaagtggtgcgcagt
ttggcctga
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