KEGG   Polaromonas vacuolata: HC248_00247
Entry
HC248_00247       CDS       T06542                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
pvac  Polaromonas vacuolata
Pathway
pvac03030  DNA replication
pvac03430  Mismatch repair
pvac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HC248_00247 (holA)
   03430 Mismatch repair
    HC248_00247 (holA)
   03440 Homologous recombination
    HC248_00247 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvac03032]
    HC248_00247 (holA)
   03400 DNA repair and recombination proteins [BR:pvac03400]
    HC248_00247 (holA)
Enzymes [BR:pvac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HC248_00247 (holA)
DNA replication proteins [BR:pvac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HC248_00247 (holA)
DNA repair and recombination proteins [BR:pvac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HC248_00247 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: QJC54984
UniProt: A0A6H2H5V7
LinkDB
Position
247175..248260
AA seq 361 aa
MNPVPAQLQEHLSRGLKSLYTLYGDEPLLIQEYADALRLAARAQGFTERTVHVVAGAHFD
WSEVLASGGSLSLFADKQIIEIRVPSGKPGKDGSAALQTIAQRAQGDDTTLTLILLPKLD
AATTKGAWFGALESAGACVRFDPVDRRNLPQWLSQRLQQQGQRVEAGEAGQRTLQFFADR
VEGNLLAAHQEIQKLVLLYPPDAGGDVLTFDQIENAVLNVARYDVFKLAEAVLGGQTMRV
ARMLDGLQAEGESEVLVHWALAEDIRSMKRVKDAIAQGRPMPMALRENRVWGVKEKLFER
ALPLISDLSLANLLHAAHKVDGIVKGLKQPDWPADGWQSLHRLAGMVCEQCAAPALSSRR
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaatccagtcccggcccaactgcaggagcacctgtctcgcggccttaaaagtctctac
acgctttacggcgacgagccgctcttgatacaagaatatgctgatgccctccggcttgca
gcacgcgcccaaggctttaccgagcgcaccgtacacgtcgtagccggtgcgcattttgat
tggagcgaagtgctcgccagcggcggttctttgagcttgtttgcggataaacaaatcatt
gaaatccgtgttcctagcggcaagcccggtaaagacggtagtgctgcgctgcagaccatc
gcccagcgcgctcaaggcgacgacactacgctcacgctaatacttttgcctaaactcgac
gcggcaaccaccaaaggggcttggtttggtgcgctagaaagtgctggcgcttgtgtccgc
tttgatcccgttgacaggcgtaatctgccgcagtggttgagccagcgtttgcagcaacag
ggtcagcgtgtcgaggctggtgaggccggtcagcgtacgctgcaattttttgccgatagg
gtggagggcaatttgctcgccgcgcaccaagaaatccaaaagctagtactgctttatccg
ccagacgcaggcggcgatgtactcacttttgaccagatcgaaaacgcggtgcttaacgtg
gcgcgctatgacgtctttaaactcgccgaagcagtcctaggcggccaaactatgcgtgtg
gctcgcatgctagacggccttcaggccgaaggcgagtcagaggtgctggtgcactgggcc
ttagctgaagacattcgcagcatgaaacgcgtgaaagacgccatcgctcaaggccggccc
atgcccatggcattgcgagaaaaccgtgtttggggtgtaaaagaaaaactttttgagcgt
gccctgccgttaatcagtgacctgagtctggctaatttgctgcatgcggcgcacaaggtc
gacggcatagttaaaggccttaaacagcccgattggccggccgatggctggcagtcgctg
caccggctagctgggatggtttgcgagcaatgtgcggcacctgcactgtcatcgcgcagg
cgttaa

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