Polaromonas vacuolata: HC248_00526
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Entry
HC248_00526 CDS
T06542
Symbol
gspF
Name
(GenBank) Putative type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvac02044
]
HC248_00526 (gspF)
02035 Bacterial motility proteins [BR:
pvac02035
]
HC248_00526 (gspF)
Secretion system [BR:
pvac02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HC248_00526 (gspF)
Bacterial motility proteins [BR:
pvac02035
]
Pilus system
Pilus assembly proteins
HC248_00526 (gspF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
QJC55248
UniProt:
A0A6H2H5W9
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Position
547406..548623
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AA seq
405 aa
AA seq
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MATVASKGIQEFVYEWEGKDRAGKPVRGEVRAAGENQVKASLRRQGVLATKIKKRRMRSG
KSIRPKDIAIFTRQLATMMKAGVPLLQSFDIVGRGNPNASVTKLLNDIRSDVETGTSLSA
AFRKYPLHFNSLYCNLVEAGEAAGILDSLLERLAVYMEKTEAIKSKIKSALMYPISVVLV
AFVVVAVIMIFVIPAFKSVFSSFGADLPAPTLMVIALSEFFVAYWWLIFGGLGGGFYFFM
QAWRRSPKMQRVMDRLVLKLPVFGSLINKSCIARWTRTLSTMFAAGVPLVEALDSVGGAS
GNSLYAYATEKIQQEVSTGTSLTAAMSNANLFPTMVLQMCAIGEESGSVDHMLGKAADFY
EAEVDEMVAGLSSLMEPIIIVFLGTIIGGIVVSMYLPIFKLGQVV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagttgcatccaagggaattcaagagtttgtctacgaatgggaaggcaaagat
cgtgccggtaagcctgtgcggggagaagttcgtgctgccggtgagaaccaagtcaaggcg
tctttgcgacgtcaaggcgtgttggcgactaagattaaaaagcgccgtatgcgctcgggg
aaatccatccggcccaaggatattgcgattttcacgcgacaactcgccaccatgatgaaa
gccggcgtgcccttgctgcagtcgtttgatatcgttggccgcggcaatccaaatgccagt
gtgaccaagctgctcaacgatattcgctcggatgttgaaaccggtacctcgctaagcgcg
gcctttcgaaaatacccactgcatttcaattccttgtattgcaatttggtcgaggccggt
gaggccgctggtattttggattctttgctagagcgtctagctgtttacatggaaaaaact
gaggccatcaagtccaagatcaagtccgcgctgatgtatccaatctctgtggtgctggtg
gcttttgtggttgtggcggtaatcatgattttcgtcataccagcttttaaaagtgtgttt
tcttcgtttggcgcggacctgcctgcgcctaccttgatggttatcgccttgagtgaattt
tttgttgcctactggtggttgatttttggcggcttgggtggtggcttttattttttcatg
caggcttggcggcgtagtcccaagatgcaaagagtcatggatcgattggtgctcaagcta
ccggtgtttggctcgctgattaataaatcctgcatcgcgcgctggacccgtacgctctcg
actatgtttgccgctggcgtgcctttggtcgaggcgcttgactcggtaggcggcgcttct
ggtaattcactctacgcttacgcgactgaaaaaattcagcaggaagtctctactggcacc
agcttaacggcggccatgtcgaatgccaatttgtttccgaccatggtgttacagatgtgc
gcgattggggaagaatccggatcggttgaccacatgctgggtaaagccgccgacttttac
gaggccgaggtcgatgaaatggtggccggcttgtccagtttgatggaacccatcatcatc
gtttttctgggcacaataattggcggcattgtggtttccatgtacttgcccatttttaag
ctcggacaggttgtctga
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