Polaromonas vacuolata: HC248_00716
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Entry
HC248_00716 CDS
T06542
Symbol
dinG_1
Name
(GenBank) putative ATP-dependent helicase DinG
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HC248_00716 (dinG_1)
09124 Replication and repair
03420 Nucleotide excision repair
HC248_00716 (dinG_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvac03021
]
HC248_00716 (dinG_1)
03036 Chromosome and associated proteins [BR:
pvac03036
]
HC248_00716 (dinG_1)
03400 DNA repair and recombination proteins [BR:
pvac03400
]
HC248_00716 (dinG_1)
Enzymes [BR:
pvac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HC248_00716 (dinG_1)
Transcription machinery [BR:
pvac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HC248_00716 (dinG_1)
Chromosome and associated proteins [BR:
pvac03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HC248_00716 (dinG_1)
DNA repair and recombination proteins [BR:
pvac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HC248_00716 (dinG_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJC55436
UniProt:
A0A6H2H7G2
LinkDB
All DBs
Position
complement(754412..756745)
Genome browser
AA seq
777 aa
AA seq
DB search
MTSSPIYTVAVRALCEFTAKHGDLDLRFTPSPSAQEGMAGHALVASRRPEGYETEVSLEG
HYKSLVVRGRADGYDPALNLLEEVKTFRGDLHNMAENRRTLHWAQLKIYGWLLCQQKGLD
AINLSLVYFDVASLQETPITECIDALSLRHFFELHCERFLAWAEQELAHRLARDVALTDL
KFPHPAFRAGQRELAEAVYKASHAGVCLLAQATTGIGKTIGTVFPLLKSMPKQRQDKLFF
LAAKTPGRQLALEALGLLQQASALPLRALELVSREKSCEHPDKACHGDSCPLARGFYDRL
PAARSAAVLHAQSGSILDKFRLRELALAHQVCPYYLSQELVRWSDVVVGDYNYYFDSSAM
LFTMSQLWQWRVSVLVDEAHNLLERGRKMYSASMDQSVLRALHATAPKAVKKVLERLDKS
LSELHKTQVAVWQVYPEIPIDFLKTLQLALSNITDFMLANPTRMDGALQDFYFEALHFSR
MADAFGPHSLFDISLLDKPDQPLALAQGCAVLNIRNILPAPFLAPRFLLARTVTLFSATL
SPRIFYRTTLGLPDDSAWIDVNSPFTAAQLKVAAVSNISTRFQHRDASLERIADLMARQY
QTEPGNYLAFTSSYDYLEKLEKLFKQRYPFISCWSQTRQMDEAGRDQFLARFSAQSQGIG
FAVLGGAFAEGVDLPGRRLIGAFIATLGMPQVNAINEEMKNRLASYMNQSGQATHSILAY
NYTYLYPGLQKVVQAAGRVIRTPSDMGVIYLMDDRFNKAEVRALLPAWWKVERLHAP
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaagtccaatttataccgtcgccgtgcgtgcactctgcgaatttaccgccaaa
cacggtgacttagacctgcgctttacgccctctccttctgcacaagaaggcatggccggt
cacgcgttggtggcctcgcgccgacccgaaggttacgagacggaagtcagcctagaaggc
cactataaaagccttgtagtgcgtggccgcgccgatggctatgacccggcgctcaatttg
ctggaagaagtcaaaaccttccgaggtgaccttcacaacatggccgagaatcggcgcacg
ctgcactgggctcaactcaagatttacggttggttgctgtgccagcaaaaaggcttggac
gcgattaatttgtcgttggtttattttgatgtcgccagtctgcaagaaacgccgatcacc
gaatgtattgatgcactgagtttgagacatttttttgagctgcactgtgaacgcttttta
gcttgggcagaacaagaattagcccaccgtctggcacgcgatgtagcgctgactgacttg
aagtttccccacccagcgtttagagccggtcaacgcgaactcgccgaagccgtctacaaa
gccagtcacgccggtgtttgcctgctagcccaagccactaccggcattggtaagacgata
ggcacggtgtttccgctgctcaaatccatgcctaagcagcgccaagacaagctatttttt
ctggccgctaaaacccccggcagacaacttgcattagaagcgctgggcttgctccagcaa
gccagcgcgttaccgctcagagcgttagagctggtgtctcgcgagaagtcttgtgaacac
ccagacaaggcttgtcatggcgactcctgcccactggcgcgtggcttttacgatcgcttg
ccagccgcccgcagtgcggctgttttgcacgcacaaagcggctcaatattggataaattt
aggctgcgcgaattggccttggcgcatcaagtctgcccctattatttgagtcaagaattg
gtgcgctggagcgacgttgtagtgggcgactacaactactactttgacagcagcgccatg
cttttcaccatgagccagctctggcaatggcgggtcagcgtactggtagacgaggctcac
aatctgctcgaacgcggccgcaaaatgtactcggccagcatggatcagagtgtgctgcgc
gcactgcatgcaaccgcacccaaggcggttaaaaaagtattagaacggttagataaaagt
ttgagcgagttgcacaaaacgcaagttgctgtctggcaggtgtatccagaaataccgatt
gattttcttaaaacactgcaactagcgctgagcaatatcaccgacttcatgctcgccaat
ccaacccgcatggacggcgcgctacaagacttttattttgaggctttgcatttctcgcgc
atggctgatgcgtttggtccgcactctctgtttgacatcagtttgctggataagcccgat
cagccactcgcgcttgcccaaggctgcgcagtgctaaacatacgcaacatactgcccgcg
ccatttttagcaccgcgctttttattggcccgaacggtgacgcttttttctgcgactttg
agtccacgtattttctaccgcacgacgctaggcctgcctgatgacagcgcttggatagac
gtcaactcgccattcacagcggcacaattaaaagtcgcagcggtgagcaatatatcgacg
cgctttcaacatcgggacgcatcgcttgagcgcattgccgacctgatggcgcgccaatac
caaacagagccgggcaattatttggcctttaccagtagctacgactacctggaaaaactc
gaaaaactgtttaaacagcgctaccccttcattagctgttggtcacaaacacggcagatg
gacgaggccggtcgggatcagtttttagcccgttttagcgcgcaatctcaaggcataggt
tttgcagtattgggcggcgcatttgctgaaggcgtggatctgccgggtcgtcgtttgatc
ggcgctttcatcgccaccttaggcatgccgcaagtcaacgccatcaatgaagaaatgaaa
aatcgcttggccagttatatgaatcaatcgggtcaagccacgcattccatactggcctac
aactacacctatctatacccgggcctgcaaaaagtcgtgcaagccgccggacgggtgata
cgcacaccgtcagacatgggtgtgatctacctgatggatgaccgctttaataaggccgaa
gtacgggcattactgccagcttggtggaaagttgagcgactgcatgcgccttga
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