Polaromonas vacuolata: HC248_00827
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Entry
HC248_00827 CDS
T06542
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvac03032
]
HC248_00827 (gyrA)
03400 DNA repair and recombination proteins [BR:
pvac03400
]
HC248_00827 (gyrA)
Enzymes [BR:
pvac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HC248_00827 (gyrA)
DNA replication proteins [BR:
pvac03032
]
Prokaryotic type
DNA Topoisomerases
HC248_00827 (gyrA)
DNA repair and recombination proteins [BR:
pvac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HC248_00827 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QJC55547
UniProt:
A0A6H2H704
LinkDB
All DBs
Position
complement(877150..879828)
Genome browser
AA seq
892 aa
AA seq
DB search
MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRHLLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHELLADLDKETVDFGPNYDGSEQEPLVMPTRLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLYLLGKPEATIDELMEIIPAPDFPTAGIIYGINGVKDGYRTGRGRV
VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEDISHIQDESDKSG
MRLVIELKRGAVPEVVLNNLYKQTQLQDTFGINMVALVNGQPKLCNLKDLIQVFLYHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIAIIRNAPTPPVAKAELMLKPWDSKLV
REMLTRARADGGVINADSYRPDGLEPLLGMGDDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKGVMAEIDDLLDILARSERVSTIISEELTAIRNEFGQTKLGARRSHIEHSSFDL
STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVVLALTGDKRTFPADQ
YVFMATSMGTVKKTALDDFNNPRKGGIIAINLDEGDFLIGAALTDGKHDVMLFSDGGKAV
RFDEEDVRPLGRTARGVRGMALDVSQSVIAMLVAEDEQQSVLTATHNGFGKRTSITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVRSEDEIMLITDKGVLVRTRVSEIREMGRATQGVT
LMALDEGSKLSGLQRIVENDATLSTEETLTPADAVPDEQTSTPDQTNPGTEE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttgcaaaagaaaccttgcccattagccttgaagaggaaatgcggcgcagc
tacctagactatgcaatgagcgtcatagtcggtcgcgcactccctgacgcacgtgatggc
ctcaagcccgttcacaggcgtgttctgttcgccatgcatgaactcaacaacgattggaac
cgaccgtataaaaagtcagcgcgtatcgttggcgatgtgattggtaaataccatccacac
ggcgatcagtcggtttacgatacgattgttcgtatggcgcaagatttttccatgcgccac
ctcttggttgacggtcaaggtaacttcggctctgtagatggtgacaacgcagcagcgatg
cgttacaccgaaatccgcttggccaaaatcgcccatgaattactggctgacttagacaaa
gaaaccgtcgactttggccctaactacgacggcagtgagcaagaacctttggtcatgcca
acccgcttacccaacttattagtaaacggctcaggcggcattgccgtcggcatggcgacg
aatataccgccgcacaatctgaatgaagtggtcgatgcctgcttgtatttactaggtaaa
ccagaagcgacgattgatgagctgatggagatcattcctgcaccggacttcccgactgcc
ggcattatttacggcatcaacggcgtgaaggacggttaccgtaccggccgtggccgggtg
gttatgcgcgccaagtgccattttgaagatatagacaagggccagcgtcagtccatcatt
gttgacgagctgccctaccaagtgaacaaaaagacgctacaagagcgcatggccgaattg
gtccatgaaaagaaaatagaagacatcagccacatccaagacgagagcgacaagtccggc
atgcgcttagtcattgaactcaagcgtggggcagtgccagaagttgtactgaacaactta
tacaagcaaacccagctccaagacacctttggcatcaacatggttgcgctggtcaatggc
caaccgaagctatgcaacctaaaagacttaattcaagtctttctgtatcaccgcagagaa
gtggttacgcgccgcaccgttttcacgttgcgaaaagcacgcgaacgcggtcatgtatta
gaaggcctagcagtagcgttagccaacattgatgaattcattgccatcatccgcaacgca
ccaacgccgccggtggccaaagccgagctcatgctcaagccttgggacagtaagctggtg
cgtgaaatgctcacccgtgcgcgcgccgacggtggagtaatcaacgccgacagctatcgc
cccgacggcttagagccgctgctaggcatgggggacgacggcttgtatcgactctcggaa
acacaggctcaggaaattttgcagatgcgcctgcaacgcctaactggcttggagcaagac
aagatagtggccgaatacaaaggcgtcatggccgaaatcgacgacctgcttgacatcttg
gcacgctcggagcgtgtctccaccatcatcagcgaagagctcaccgcgattcgcaatgag
ttcggtcaaaccaagctgggcgcacgccgcagtcatattgagcacagctcttttgattta
agtaccgaggacttaatcacgcccaccgacatggtggtcacgctatcccacaccggctac
atcaagagccagcctttatccgaatatcgtgcgcaaaaacgcggtggacgcggcaaacag
gctacagccaccaaagaagacgactgggtagaccagctctttatcgccaatactcacgac
tacatattgtgcttttccaaccgtggccggctttactggctcaaggtctgggaagtacct
gctggttcgcgcggctcacgcggtcgccccatcgtcaacatgtttccgttgcaagagggt
gaaaaaatcaatgtggtgctggcactcaccggcgacaagcggaccttccctgcggaccaa
tatgtattcatggcaacatccatgggaaccgtcaagaaaaccgcattagacgactttaac
aacccacgcaaaggcggcattatcgccatcaacctggacgagggcgacttcctaataggt
gctgcactgaccgatggcaaacacgacgtcatgctgtttagcgacggtggtaaagccgtg
cgctttgacgaagaagacgtacgcccgctaggccgaacagcacgtggcgtgcgcggcatg
gcactcgatgtcagccaaagcgtcatcgccatgttggtggcagaagacgagcagcaaagc
gttttaaccgccacccataacggcttcggtaagcgcacctcgattaccgaatacacccgc
catggccgcggcaccaagggcatgattgccatccaacaaagcgagcgcaacggcaaagtc
gtagccgctacgctggtgcgtagcgaagatgaaatcatgctcattacagataagggcgtg
ttggtacgtacccgcgtgagtgaaattcgcgagatgggccgcgctacacagggcgtcaca
ttgatggcactagatgagggctctaaattgagcggattgcagcgtattgttgaaaatgac
gcgacactatcgacagaagaaacgctaacaccagctgatgccgtcccagacgaacaaacc
agcacaccagatcaaaccaacccgggaacagaagaatga
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