Polaromonas vacuolata: HC248_00828
Help
Entry
HC248_00828 CDS
T06542
Symbol
oprF
Name
(GenBank) Outer membrane porin F
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvac02000
]
HC248_00828 (oprF)
Transporters [BR:
pvac02000
]
Other transporters
Pores ion channels [TC:
1
]
HC248_00828 (oprF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
CHB_HEX_C_1
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
QJC55548
UniProt:
A0A6H2H6R3
LinkDB
All DBs
Position
880086..880727
Genome browser
AA seq
213 aa
AA seq
DB search
MNKLNKFAMLFASAALVTAAGAQTVDNWKSGNGELNWKNGTNELCWRDANWTPATASPDC
DGAIKPVVAAAPVAAAPAAKPAPAPVVVPVAPPAATKVTYAADAFFDFDRSVIKPAGKAK
LDDLISKIKGINLEVIIAVGHTDSVGSDKYNQKLSVNRSEAVKAYLVSKGVEKNRVYTEG
KGEKQPVADNKTAEGRAKNRRVEIEVVGTRSSK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactcaacaaatttgcaatgttgtttgcttccgcagcgctcgttacggctgct
ggtgcacaaacagtcgataactggaaaagcggtaacggcgagttgaactggaaaaacggt
actaacgagctgtgctggcgcgatgccaattggacgcctgctacggcgtctcctgattgc
gacggtgctatcaagcctgtcgttgctgcggcccctgttgcggccgctcctgctgctaaa
ccagcacctgcaccagttgtggtgccagttgcgcctccagcagcaaccaaagttacttac
gcagccgatgcgttctttgactttgaccgctctgttatcaagccagcaggtaaagccaag
cttgacgacctgatcagcaagatcaaaggcatcaaccttgaagtcatcatcgccgtgggt
cacactgactccgtcggtagcgacaagtacaaccagaagctgtcggttaatcgttcggaa
gccgtcaaggcatacttggtgtctaagggcgtcgagaaaaaccgcgtctacaccgaaggt
aaaggcgagaagcagccagttgcagacaacaagactgcagaaggccgcgctaaaaaccgt
cgcgttgagatcgaagttgttggaacacgttctagcaagtaa
DBGET
integrated database retrieval system
