Polaromonas vacuolata: HC248_00942
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Entry
HC248_00942 CDS
T06542
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvac03016
]
HC248_00942 (truA)
Enzymes [BR:
pvac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HC248_00942 (truA)
Transfer RNA biogenesis [BR:
pvac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HC248_00942 (truA)
Prokaryotic type
HC248_00942 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PD40
Motif
Other DBs
NCBI-ProteinID:
QJC55660
UniProt:
A0A6H2H753
LinkDB
All DBs
Position
complement(992525..993307)
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AA seq
260 aa
AA seq
DB search
MRIALGISYSGSAYQGWQSQLSGNTVQDKLELALARFSTGPIRVNCAGRTDAGVHALMQV
AHFDTSLQRDIASWVRGTNSFLPHDIAVQWAREVPDDFHCRGSATSRRYAYVVLESPVRP
SIERGRVGWVFRPLNGPAMQEAAALLIGEHDFSSFRAAQCQAKSPIKTISRIDISQRAGY
WRFEFEANAFLHHMIRNIMGCLMAVGQGAQAPDWINQVLAAKRRDAAAPTFSPDGLYFLG
PRYEDRYGLPERTAAYDWLP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgcgctaggcatcagctatagcggcagcgcctaccaaggctggcaaagccag
ttatcgggcaacacagtacaagacaaactcgaactggccttggcacgtttttccaccggg
ccaatacgggtaaactgcgccggacgcaccgacgccggggtacacgccttaatgcaagtg
gcccactttgacacctcgctgcagcgcgacatcgcctcgtgggtgcgcggcacaaatagt
ttcttgccgcatgacatcgccgtgcaatgggcgcgcgaagtgccggacgattttcattgc
cggggcagcgcgacatcgcggcgttatgcctacgtggtgctggagtcgccagtgcggccc
agcattgaacgcggtcgggtcggttgggtgtttcgtcccctcaacggaccggcgatgcaa
gaagccgctgcgttgctgataggtgagcacgatttcagctcttttcgcgccgcacaatgc
caagccaaatcgccgattaaaacgatttcccgcatagacatcagccagcgtgcaggctac
tggcgctttgaatttgaagccaacgcgtttttgcatcacatgattcgcaacatcatgggc
tgcttaatggcagtcggccaaggcgcgcaagcgcctgattggattaatcaggtcctagcg
gccaagcggcgcgatgcagcagcgcctaccttctcacccgatggtctgtattttttaggc
ccacgctatgaagaccgttacggcttgccagaacgcacagccgcctatgattggcttcca
tga
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