Polaromonas vacuolata: HC248_01052
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Entry
HC248_01052 CDS
T06542
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac00521
Streptomycin biosynthesis
pvac00523
Polyketide sugar unit biosynthesis
pvac00525
Acarbose and validamycin biosynthesis
pvac00541
Biosynthesis of various nucleotide sugars
pvac01100
Metabolic pathways
pvac01110
Biosynthesis of secondary metabolites
pvac01250
Biosynthesis of nucleotide sugars
Module
pvac_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HC248_01052 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HC248_01052 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
HC248_01052 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HC248_01052 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
HC248_01052 (rfbB_1)
Enzymes [BR:
pvac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HC248_01052 (rfbB_1)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QJC55769
UniProt:
A0A6H2H7C8
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All DBs
Position
1109709..1110782
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AA seq
357 aa
AA seq
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MTILVTGAAGFIGANFVLDWLAQSDETVVNLDKLTYAGNQESLASLNGDARHIFVQGDIG
DSALLASLLAQHQPRAVINFAAESHVDRSIHSPEDFIQTNIVGTFRLLEAVRAYWGALDA
EAKTAFRFLHVSTDEVYGSLAKNEPAFTEEHRYEPNSPYSASKAASDHLVRAYHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLMIVNAQAGKPLPVYGDGQQIRDWLYVKDHCSAIRRVLE
AGNVGEVYNVGGWNEMPNLDIVHKVCSLLDELKPRLDGKPYKEQISYVTDRPGHDRRYAI
DARKIEQQLGWKPAETFESGIRKTVQWYLDNPDWVANVQSGSYREWVAKQYSAGIPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgactattctcgtcaccggtgcagccggctttataggcgccaactttgttcttgattgg
ctggcccagtctgacgagactgtcgtcaacttagataagctaacttatgccggcaaccaa
gaatcgctggcgtcactgaacggtgatgcgcggcatatctttgtgcaaggcgatatcggc
gacagcgcgctgcttgccagcctgctggcacagcaccagcccagagccgtcatcaacttc
gccgctgaaagccatgtggaccgctccatccacagccctgaagacttcatccagaccaac
atcgtcggcacctttaggttgcttgaagcggtgcgtgcttactggggcgcattagatgca
gaggctaaaacagcatttaggtttttgcacgtttcaaccgacgaagtctatggctcgctt
gccaagaacgaacctgcatttactgaagagcatcgctacgagcccaacagcccgtactcg
gccagcaaggccgccagcgaccacttggtgcgcgcctaccaccatacctacggcttaccg
gtactcaccaccaactgcagcaataactacggcccgtaccatttccccgaaaagcttatc
ccactaatgattgtgaatgcgcaagcgggcaagcctttgccggtgtatggcgacggccaa
cagattcgtgactggctttacgttaaagaccattgcagcgcgattcgccgcgtgctcgaa
gccggcaatgtgggtgaggtttacaacgtaggcggctggaatgaaatgcccaacctagac
atcgtgcacaaagtgtgcagtctgctcgatgagctcaaaccccgcttagacggcaagcct
tacaaagaacaaatcagttacgtgaccgaccggcccggccacgacaggcgctacgcgatt
gacgcacgaaagattgagcagcagctaggctggaaaccagccgagacttttgagtctggc
attcgcaaaaccgttcagtggtatttagacaatcccgattgggttgccaacgtgcaaagc
ggcagttaccgcgaatgggtggccaagcaatacagcgctggtatacctgcatga
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