Polaromonas vacuolata: HC248_01088
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Entry
HC248_01088 CDS
T06542
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac00250
Alanine, aspartate and glutamate metabolism
pvac00310
Lysine degradation
pvac00350
Tyrosine metabolism
pvac00650
Butanoate metabolism
pvac00760
Nicotinate and nicotinamide metabolism
pvac01100
Metabolic pathways
pvac01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HC248_01088 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HC248_01088 (gabD)
00310 Lysine degradation
HC248_01088 (gabD)
00350 Tyrosine metabolism
HC248_01088 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HC248_01088 (gabD)
Enzymes [BR:
pvac01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HC248_01088 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HC248_01088 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HC248_01088 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
QJC55805
UniProt:
A0A6H2H7G7
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Position
complement(1153132..1154610)
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AA seq
492 aa
AA seq
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MDMKTSPLAQLKDPSLFKTDALISGKWISSSSRFDVLDPATGHKLADVANLTAADATIAI
DAANAAWPAWRNKTGKERHAILMKWFALLMANQDDLARIMTAEQGKPFAEAKGEIAYGAS
FVEWFAEEAKRVNGETLPQFDNSRRLMVIKQPIGVCAAITPWNFPLAMITRKVAPALAAG
CTVVIKPAELTPLTALAAAELAVRAGIPAGVLNILSADDDNSIAIGKVICDSDIVRHLSF
TGSTEVGRILMAQSAPSVKKLSLELGGNAPFIVFDDADVDSAVEGAMASKYRNAGQTCVC
ANRIYVQDAVYDQFVAKFSAKVKLLKVGNGFEDGVSQGPLIEEAALEKVAKHVADALAKG
GKLQAGGKRLAGQFFEPTVISDATPDMLCAKEETFGPFAPVFRFKAEQEAIDAANNTEFG
LASYFYSRDIGRIYRVAEALEYGMVGINVGVIATEHVPFGGVKQSGLGREGSSHGMEEYI
EMKYLCLGDINK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaaaacctctcccctggcccaactcaaagaccccagcctgtttaagactgac
gcgttaattagtggcaaatggattagtagcagttcacgttttgatgtgctggacccagcc
accggccacaagttggccgacgtcgccaacctcaccgcagccgatgcaaccatcgccatc
gatgcggcgaatgcggcttggccagcttggcgcaacaagaccggcaaagagcggcatgcg
attttgatgaaatggtttgcccttctcatggccaaccaagatgatttggcccgcatcatg
accgccgaacaaggcaaaccgtttgccgaagccaagggcgaaatcgcctacggtgcgagc
ttcgtcgagtggtttgctgaagaagccaaacgcgtcaatggcgaaaccctgccccagttc
gacaacagccgccgcctgatggtcattaagcaaccgataggcgtttgcgccgctatcacg
ccgtggaatttcccactcgccatgatcacgcgcaaagtcgcaccagcactggctgctggt
tgcacggtagtgattaagcccgcagaactgacaccgctaaccgcgctggccgcggctgaa
ctggcggttcgcgcgggcattccagccggcgtgctcaacatacttagcgctgacgacgat
aactcgattgcgattggcaaagttatttgcgacagcgacatcgtgcgccacctgagcttt
accggttccaccgaagtcggccgcatattgatggcgcaaagcgcgccatcggtgaaaaag
ctctccttagagttgggcggcaatgcgcccttcatcgtgtttgatgatgccgatgtcgac
tccgccgtcgaaggcgcgatggccagcaaataccgcaacgccggccagacctgcgtttgc
gccaaccgcatttatgtgcaggacgctgtttacgatcaattcgtcgccaagttcagcgcc
aaggtcaaattgcttaaagttggtaatggttttgaagacggcgtctcgcaaggcccgctg
atcgaagaagcggcacttgaaaaagttgccaagcacgtggccgatgcactcgctaaaggc
ggcaaactgcaagctggcggtaaacgcttagccggtcaattctttgagcccacagtgatc
tcagacgccacgccagacatgctttgcgccaaggaagaaacctttggcccgttcgcgcca
gtgtttagattcaaggccgagcaagaagcgatcgacgcggccaacaacaccgagttcggt
ctggccagctatttttacagccgcgacattggccgcatctaccgcgtggccgaagccttg
gaatacggcatggtgggcattaacgtcggcgtgatcgccactgagcatgtaccgttcggc
ggcgtcaagcagtccggtctgggccgcgaaggctctagccacggcatggaggagtacatc
gaaatgaagtacctctgcctaggcgatattaataaataa
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