KEGG   Polaromonas vacuolata: HC248_01117
Entry
HC248_01117       CDS       T06542                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pvac  Polaromonas vacuolata
Pathway
pvac00740  Riboflavin metabolism
pvac01100  Metabolic pathways
pvac01110  Biosynthesis of secondary metabolites
pvac01240  Biosynthesis of cofactors
pvac02024  Quorum sensing
Module
pvac_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pvac00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    HC248_01117 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HC248_01117 (ribD)
Enzymes [BR:pvac01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     HC248_01117 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     HC248_01117 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Methyltranf_PUA UPF0113
Other DBs
NCBI-ProteinID: QJC55834
UniProt: A0A6H2H8B5
LinkDB
Position
complement(1185644..1186729)
AA seq 361 aa
MALALAQAAEARLICPPNPAVGAVLVDVQGQVLGFGHTQVRGGPHAEVMALRHASEQGHS
TLGATLYVTLEPCSHHGRTPPCCDAVIAAGISKVVAAIADPNPLVAGQGFERLRAAGISV
EVGLGAAQSRELNIGFFSRMIRRRPWLRLKVASSLDGKTALKNGQSQWITGPEARADGHV
WRARSCAVLTGIGTVLEDNPRLDVRGIATPRQPRLVVVDSRLQTPPNAALFAADRPVLIY
AAVRDAHKQAALQASGASVIYLPDANGKVDLEAMLTDLATREVNEIHLEAGHKLNGSFIR
AALVDELLHYIAPKLIGHGQDLALLGPLTEIDQAWALEFLSADRVGPDLRVIARPSGRDQ
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggctctggcgctggctcaagctgccgaggctaggctcatctgcccaccgaaccccgcc
gttggcgcggtcttagtcgatgttcagggccaggtattaggttttggccatacccaagtg
cgcggtggtccacatgccgaagtcatggctttgcgtcacgccagcgaacaaggccacagc
acgctaggcgctacgctttacgtgacgctagagccctgctcccaccacggccgcacaccg
ccctgctgtgatgcggtgatcgctgctggcatcagcaaggtcgtcgccgcgattgccgac
cccaatccactggtagccggtcaaggttttgagcggctgcgcgcagctggcatcagcgtc
gaagtcggcttaggcgcagcacagtcgcgcgagctcaatatcggttttttcagccgcatg
attcgccgccggccttggttaaggctaaaagtagcctcttcactagacggcaaaacagca
cttaaaaacggccaaagccaatggataacaggcccagaagcacgcgccgacggtcacgtt
tggcgcgcccgcagctgcgccgtgctgaccggcattggcacggtgctagaagacaatccc
aggctggatgtacgcggcattgccacgccgcgccagccccggctggtggtggtcgacagc
cggctgcaaacgccgcccaacgcagcgcttttcgcggccgatagaccggtcttgatttat
gccgccgtgcgcgacgcgcataagcaagctgcgctgcaagcgagcggcgctagcgtgatt
tatctgcctgacgccaacggcaaggtcgacttagaagccatgctcaccgatttagccacg
cgagaagtcaacgaaatacacctagaagccggccacaaactcaacggctctttcatacgc
gcagcgctggtcgacgagttgctgcactacattgcgcccaaactcataggccatggccaa
gacttggcgttattggggccgctcactgagatagaccaagcctgggccttggaattcctg
tccgccgacagggttggcccagatctgcgtgtaatagcaagacctagcgggcgagatcag
ttctga

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